DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCX-EMAP and Eml1

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:XP_017170657.1 Gene:Eml1 / 68519 MGIID:1915769 Length:885 Species:Mus musculus


Alignment Length:155 Identity:31/155 - (20%)
Similarity:55/155 - (35%) Gaps:34/155 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 TCELWFALSWLLDQLPKLCPVNRLTDLGVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPP 416
            ||:..|...:.:|.. |:..|::...:...:|..        :|...||.        ..|.:||
Mouse   293 TCDKKFRTQFYIDWC-KISLVDKTKQVSTYQEVV--------RGEGILPD--------GGEYKPP 340

  Fly   417 LVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRN---PE 478
            ..      |:.:.||..:.|.........||:.|..||        ::..||:..:|.||   |:
Mouse   341 SD------SLKSRDYYTDFLVTLAVPSAVALVLFLILA--------YIMCCRREGVEKRNMQTPD 391

  Fly   479 AYFGQKRNFLKNKVRLDFVRERRRV 503
            .......:..|:...|..:.:.|.:
Mouse   392 IQLVHHSSIQKSTKELRDMSKNREI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711
DCX2_RP_like 300..372 CDD:340590 5/19 (26%)
HELP 449..515 CDD:460922 12/58 (21%)
WD40 520..562 CDD:459801
WD40 repeat 530..573 CDD:293791
WD40 548..959 CDD:441893
WD40 repeat 582..624 CDD:293791
WD40 repeat 627..664 CDD:293791
WD40 repeat 673..712 CDD:293791
WD40 repeat 718..801 CDD:293791
WD40 repeat 806..838 CDD:293791
WD40 repeat 846..880 CDD:293791
WD40 847..>1073 CDD:475233
WD40 repeat 886..918 CDD:293791
WD40 repeat 931..969 CDD:293791
WD40 repeat 1002..1037 CDD:293791
Eml1XP_017170657.1 TD_EMAP1 77..133 CDD:409268
HELP 258..329 CDD:460922 8/44 (18%)
WD40 332..379 CDD:197651 14/68 (21%)
WD40 repeat 345..393 CDD:293791 14/55 (25%)
WD40 repeat 398..438 CDD:293791 3/19 (16%)
WD40 <418..769 CDD:441893
WD40 repeat 444..486 CDD:293791
WD40 repeat 492..527 CDD:293791
WD40 repeat 533..598 CDD:293791
WD40 repeat 617..652 CDD:293791
WD40 692..>884 CDD:475233
WD40 repeat 698..739 CDD:293791
WD40 repeat 745..769 CDD:293791
WD40 repeat 812..851 CDD:293791
WD40 repeat 857..884 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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