DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCX-EMAP and eml1

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:XP_012823784.1 Gene:eml1 / 548488 XenbaseID:XB-GENE-949779 Length:815 Species:Xenopus tropicalis


Alignment Length:246 Identity:49/246 - (19%)
Similarity:79/246 - (32%) Gaps:80/246 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 SPNLRN------PKGRS-DLPGIDVFVSTA-------DPEKEPPLVTANTILSILAVDYPVEKL- 436
            ||.::.      |.|.. |:||.|...|..       |||:||.......         |..|: 
 Frog    27 SPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKG---------PAPKML 82

  Fly   437 ---ACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVR 498
               .|.:..|..:...:..|:            |.             |.|..|.::.||   ..
 Frog    83 GHELCRVCGDKASGFHYNVLS------------CE-------------GCKGFFRRSVVR---GG 119

  Fly   499 ERRRVKR-----EYDEF------KVRINSLPEAIRRRSDAYNVHEELRAKKKQMEMMMGNNPQET 552
            .||...|     :.|.|      :.|:....||..|.....: .|::|.||.:.:.....:..::
 Frog   120 ARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLS-EEQIRKKKIRKQQQESQSQSQS 183

  Fly   553 VIVPKATWMSDGSHWPGTWSSGETDNSRGDHAG-----------IIQAMLA 592
            .:.|:.:  |..:..||....|....|:|...|           :||.::|
 Frog   184 PVGPQGS--SSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVA 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711
DCX2_RP_like 300..372 CDD:340590
HELP 449..515 CDD:460922 13/76 (17%)
WD40 520..562 CDD:459801 7/41 (17%)
WD40 repeat 530..573 CDD:293791 8/42 (19%)
WD40 548..959 CDD:441893 11/56 (20%)
WD40 repeat 582..624 CDD:293791 4/22 (18%)
WD40 repeat 627..664 CDD:293791
WD40 repeat 673..712 CDD:293791
WD40 repeat 718..801 CDD:293791
WD40 repeat 806..838 CDD:293791
WD40 repeat 846..880 CDD:293791
WD40 847..>1073 CDD:475233
WD40 repeat 886..918 CDD:293791
WD40 repeat 931..969 CDD:293791
WD40 repeat 1002..1037 CDD:293791
eml1XP_012823784.1 TD_EMAP2 32..79 CDD:409269 13/55 (24%)
HELP 177..248 CDD:460922 11/58 (19%)
WD40 repeat 221..258 CDD:293791 3/12 (25%)
WD40 254..298 CDD:197651
WD40 repeat 263..309 CDD:293791
WD40 repeat 318..360 CDD:293791
WD40 337..703 CDD:441893
WD40 repeat 367..412 CDD:293791
WD40 repeat 420..452 CDD:293791
WD40 repeat 463..500 CDD:293791
WD40 repeat 505..541 CDD:293791
WD40 repeat 547..582 CDD:293791
WD40 repeat 589..621 CDD:293791
WD40 repeat 629..669 CDD:293791
WD40 repeat 675..699 CDD:293791
WD40 repeat 742..781 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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