DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DCX-EMAP and DCDC2

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:NP_057440.2 Gene:DCDC2 / 51473 HGNCID:18141 Length:476 Species:Homo sapiens


Alignment Length:493 Identity:107/493 - (21%)
Similarity:187/493 - (37%) Gaps:157/493 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 SAAASRYNNLSYWKARRVVFYRNGDPFFPGVELRYRPGRDVTSLDNLLDKISPKMDLPRGA-RYV 219
            |.:::|.::||....:.|:.|||||||:.|..:.... :.|:|.:..|.:::..:..|.|| |.:
Human     2 SGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVRNI 65

  Fly   220 FS-MDGDRKYHLDELEDGAFYVVSSFKAFKPASY---G--KKNGMWYASPGNQGWGSKPA----- 273
            :: ..|.|...||:::.|..||....:|||..:|   |  ||..|...:.     ..||.     
Human    66 YTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNT-----EVKPVIHSRI 125

  Fly   274 -----SRKPSIMEADLGTLSTTSGSIKRSAGRVI---RIINNLDHSVQCRVLLNLRTSQPFEEVL 330
                 .|||  ::.........:|.:...|.|::   :.:|..||.:|.              |.
Human   126 NVSARFRKP--LQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQM--------------VT 174

  Fly   331 EDLGQVLKINGAKKMYTGTGQEVRSFSQLRNEFADVDTFYLATGTALIAGSPIRRSRSRPSVVAA 395
            |.:  .|:.....::||..|:.|.|.::|.|     ..||:|.|          |.:.:.     
Human   175 EKI--TLRSGAVHRLYTLEGKLVESGAELEN-----GQFYVAVG----------RDKFKK----- 217

  Fly   396 APILPTDEL--PKVPLRGARP---RSKSRPRILYAPESEILRPNGEYTMLDIMKEEPTKVTIRGL 455
               ||..||  .|..:|  ||   ::.|.|.|:.:.:|   :.:|        .:..:|.|:   
Human   218 ---LPYSELLFDKSTMR--RPFGQKASSLPPIVGSRKS---KGSG--------NDRHSKSTV--- 263

  Fly   456 RRTFYPPVHHAPADNSPPD---KKLQLQWVHGYRGIDARRNLWV------LPSGELLYYVAAV-- 509
                      ..:|||.|.   :|.:.:.|:..:....::|:.:      :|:.:...:.|..  
Human   264 ----------GSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNSQETIPNSDEGIFKAGAER 318

  Fly   510 -----AVLFDRDEDAQRHYTGHTEDIMCMDVHPSRELV---ASGQKAGRDRKSQAHVRIWSTESL 566
                 |.....|||.|..        :.:|..|: |:|   ..|:||.:|.:.:..         
Human   319 SETRGAAEVQEDEDTQVE--------VPVDQRPA-EIVDEEEDGEKANKDAEQKED--------- 365

  Fly   567 QTLYVFGMGELDSGVTAVAFSQLNGGSYILAVDSGRES 604
                               ||.:||.   |..:.|||:
Human   366 -------------------FSGMNGD---LEEEGGREA 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711 28/91 (31%)
DCX2_RP_like 300..372 CDD:340590 17/74 (23%)
HELP 449..515 CDD:460922 12/81 (15%)
WD40 520..562 CDD:459801 9/44 (20%)
WD40 repeat 530..573 CDD:293791 8/45 (18%)
WD40 548..959 CDD:441893 10/57 (18%)
WD40 repeat 582..624 CDD:293791 8/23 (35%)
WD40 repeat 627..664 CDD:293791
WD40 repeat 673..712 CDD:293791
WD40 repeat 718..801 CDD:293791
WD40 repeat 806..838 CDD:293791
WD40 repeat 846..880 CDD:293791
WD40 847..>1073 CDD:475233
WD40 repeat 886..918 CDD:293791
WD40 repeat 931..969 CDD:293791
WD40 repeat 1002..1037 CDD:293791
DCDC2NP_057440.2 DCX1_DCDC2 17..96 CDD:340669 25/79 (32%)
DCX2_DCDC2 138..217 CDD:340672 22/109 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..476 37/212 (17%)
2A1904 <262..471 CDD:273344 31/173 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.