DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCX-EMAP and Dcdc2

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:NP_001099580.2 Gene:Dcdc2 / 291130 RGDID:1310227 Length:475 Species:Rattus norvegicus


Alignment Length:476 Identity:104/476 - (21%)
Similarity:181/476 - (38%) Gaps:118/476 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 RYNNLSYWKARRVVFYRNGDPFFPGVELRYRPGRDVTSLDNLLDKISPKMDLPRGA-RYVFS-MD 223
            |.::||....:.|:.||||||||.|..:.... :.|:|.|..|.:::..:..|.|| |.::: ..
  Rat     7 RSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHE-KKVSSFDIFLKEVTGGVQAPFGAVRNIYTPRT 70

  Fly   224 GDRKYHLDELEDGAFYVVSSFKAFKPASY---G--KKNGMWYASPGNQGWGSKP--------ASR 275
            |.|...||::|.|..||....:|||..:|   |  ||..|...:.     ..||        ::|
  Rat    71 GHRIRKLDQIESGGNYVAGGQEAFKKLNYLDIGEIKKRPMEAVNT-----EVKPVIHSKINVSAR 130

  Fly   276 KPSIMEADLGTLSTTSGSIKRSAGRVI---RIINNLDHSVQCRVLLNLRTSQPFEEVLEDLGQVL 337
            ....:..........:|.:...|.|::   :.:|..||.:|.              |.|.:  .|
  Rat   131 FRKALHEPCTIFLIANGDLISPASRLLIPRKALNQWDHVLQM--------------VTEKI--TL 179

  Fly   338 KINGAKKMYTGTGQEVRSFSQLRNEFADVDTFYLATGTALIAGSPIRRSRSRPSVVAAAPILPTD 402
            :.....::||..|:.|.|.::|.|     ..||:|.|          |.:.:.        ||..
  Rat   180 RSGAVHRLYTLEGKLVESGAELEN-----GQFYVAVG----------RDKFKR--------LPYS 221

  Fly   403 EL--PKVPLRGARP---RSKSRPRILYAPESEILRPNGEYTMLDIMKEEPTKVTIRGLRRTFYPP 462
            ||  .|..:|  ||   ::.|.|.::.:.:|   :.:|.|        ..:|.||.....:...|
  Rat   222 ELLFDKSAMR--RPYGQKASSLPPMVGSRKS---KGSGNY--------RQSKSTIGSSDNSSPQP 273

  Fly   463 VHHAPADNSPPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAV-------AVLFDRDEDAQ 520
            :......:|..:|..:::     :.:.::.:...:|..:...:.|..       |.....|||.|
  Rat   274 LKRKGKKDSNSEKPTKVK-----QSVKSKNSHQAIPDNDEGIFKAGAERSETRGAAEVQEDEDTQ 333

  Fly   521 RHYTGHTEDIMCMDVHPSRELV---ASGQKAGRDRKSQAHVRIWSTESLQTLYVFGM-------- 574
            ..        :.:|..|: |:|   ..|:|..:|...:......:.|:....   |.        
  Rat   334 VE--------VPVDQRPA-EIVDEEEDGEKTSKDANQKDDFSAMNGEAEDRA---GSKVADAPEE 386

  Fly   575 --GELDSGVTAVAFSQLNGGS 593
              |..|.|....:.|::|||:
  Rat   387 EEGIPDQGEKKASPSRVNGGT 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711 31/91 (34%)
DCX2_RP_like 300..372 CDD:340590 17/74 (23%)
HELP 449..515 CDD:460922 9/72 (13%)
WD40 520..562 CDD:459801 8/44 (18%)
WD40 repeat 530..573 CDD:293791 8/45 (18%)
WD40 548..959 CDD:441893 10/56 (18%)
WD40 repeat 582..624 CDD:293791 4/12 (33%)
WD40 repeat 627..664 CDD:293791
WD40 repeat 673..712 CDD:293791
WD40 repeat 718..801 CDD:293791
WD40 repeat 806..838 CDD:293791
WD40 repeat 846..880 CDD:293791
WD40 847..>1073 CDD:475233
WD40 repeat 886..918 CDD:293791
WD40 repeat 931..969 CDD:293791
WD40 repeat 1002..1037 CDD:293791
Dcdc2NP_001099580.2 Ubl1_cv_Nsp3_N-like 17..96 CDD:475130 28/79 (35%)
DCX2_DCDC2 138..217 CDD:340672 22/109 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..475 34/202 (17%)
2A1904 <250..>445 CDD:273344 32/186 (17%)
Blue background indicates that the domain is not in the aligned region.

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