DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DCX-EMAP and EML3

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:XP_006718552.1 Gene:EML3 / 256364 HGNCID:26666 Length:968 Species:Homo sapiens


Alignment Length:787 Identity:239/787 - (30%)
Similarity:355/787 - (45%) Gaps:159/787 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 ASPGNQGWGSKP-----ASRKPSIMEADLGTLSTTSGSIKRSAGRV----IRIINNLDHSVQCRV 316
            :|||..|..:.|     ||.:||      ||.|...||....||..    |              
Human   146 SSPGPPGLSNGPPAPQGASEEPS------GTQSEGGGSSSSGAGSPGPPGI-------------- 190

  Fly   317 LLNLRTSQPFEEVLEDLGQVLKINGAKKMYTGTGQEVRSFSQLRNEFADVDTFYLATGTALIAGS 381
               ||..||.:                          |:.:..||..:              :.|
Human   191 ---LRPLQPPQ--------------------------RADTPRRNSSS--------------SSS 212

  Fly   382 PIRRSRSRPS--VVAAAPILPTDELPKVPLRGARPRSKSRPRILYAPESEILRPNGEYTMLDIMK 444
            |..|.|.:.|  .:::|.:|         :|.....|:.....|.:|.....| ...|.:..|  
Human   213 PSERPRQKLSRKAISSANLL---------VRSGSTESRGGKDPLSSPGGPGSR-RSNYNLEGI-- 265

  Fly   445 EEPTKVTIRGLRRTFYPP-----VHHAPADNSPPDKKLQLQWVHGYRGIDARRNLWVLPSGELLY 504
              ..|:.:||...|.|.|     :...|  :.||.:.|.|.||:||||.|:|.||:||.|||::|
Human   266 --SVKMFLRGRPITMYIPSGIRSLEELP--SGPPPETLSLDWVYGYRGRDSRSNLFVLRSGEVVY 326

  Fly   505 YVAAVAVLF-------DRDEDAQRHYTGHTEDIMCMDVHPSRELVASGQKAGRDRKS---QAHVR 559
            ::|.|.||:       ......||||.|||:.:.|:.|||....|||||.||.|:..   |..|.
Human   327 FIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAGVDKDGKPLQPVVH 391

  Fly   560 IWSTESLQTLYVFGMGELDSGVTAVAFSQLNGGSYILAVDSGRESILSVWQWQWGHLLGKVATLQ 624
            ||.:|:|..|...|:|..:.||.|:|||..:.|:::..||...|.:||||....|..|.::.:..
Human   392 IWDSETLLKLQEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGMKLAEIKSTN 456

  Fly   625 EGLSGAAFHPLDDNLIITHGRGHLAFWH-------------RRKDGFFERTDIVKQPSRSHVTSV 676
            :.:....|:|.|.:.|:|.|:.|:.||:             .||.|.|.:   .|:|  ..:...
Human   457 DSVLAVGFNPRDSSCIVTSGKSHVHFWNWSGGVGVPGNGTLTRKQGVFGK---YKKP--KFIPCF 516

  Fly   677 QFEPDGDVITADSDGFITIYS---VDS-----DGA---YFVRTEFEAHNKGIGCLIMLGEGTLLS 730
            .|.||||::|.||:|.|..:.   .||     .||   |.:..:..||...|..|.:..:||:||
Human   517 VFLPDGDILTGDSEGNILTWGRSPSDSKTPGRGGAKETYGIVAQAHAHEGSIFALCLRRDGTVLS 581

  Fly   731 GGEKDRKIAAWD----SLQNYKKIADTKLPEAAGGVRTIYPQRPGRNDG---NIYVGTTRNNILE 788
            ||.:||::..|.    :||      :.::||..|.||.|       .:|   .:.||||:|.:|.
Human   582 GGGRDRRLVQWGPGLVALQ------EAEIPEHFGAVRAI-------AEGLGSELLVGTTKNALLR 633

  Fly   789 GSLQRRFTQVVFGHGRQLWGLAAHPDDELYATAGHDKHVALW--RKNKLIWTIQTGYECVALAFH 851
            |.|.:.|:.|:.||..:||||..||....:.|.|||:.:.||  ..:.|.|:|......:...||
Human   634 GDLAQGFSPVIQGHTDELWGLCTHPSQNRFLTCGHDRQLCLWDGESHALAWSIDLKETGLCADFH 698

  Fly   852 PFG-TLAAGSTEGHLLVINCENGAVMLTLRVCGSPLNCVAYNQVGDMIAMGSQNGSIYLFRVSRD 915
            |.| .:|.|...|..||::.|...::..:......|:.|.|:..|..:|:||.:..||::.||.|
Human   699 PSGAVVAVGLNTGRWLVLDTETREIVSDVIDGNEQLSVVRYSPDGLYLAIGSHDNVIYIYSVSSD 763

  Fly   916 GFSYKKVNKIRG-SQPLTHLDWSMDGNFVQTVTIDFDLLFWD-AKSLSPERSPIAMKDVKWLTNN 978
            |....:..:..| |..:||||||.||||:.:.:.|:::|:|| |......::....:|.:|.|..
Human   764 GAKSSRFGRCMGHSSFITHLDWSKDGNFIMSNSGDYEILYWDVAGGCKQLKNRYESRDREWATYT 828

  Fly   979 CTVGFLV 985
            |.:||.|
Human   829 CVLGFHV 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711
DCX2_RP_like 300..372 CDD:340590 8/75 (11%)
HELP 449..515 CDD:460922 31/77 (40%)
WD40 520..562 CDD:459801 22/44 (50%)
WD40 repeat 530..573 CDD:293791 19/45 (42%)
WD40 548..959 CDD:441893 147/449 (33%)
WD40 repeat 582..624 CDD:293791 14/41 (34%)
WD40 repeat 627..664 CDD:293791 13/49 (27%)
WD40 repeat 673..712 CDD:293791 15/49 (31%)
WD40 repeat 718..801 CDD:293791 29/89 (33%)
WD40 repeat 806..838 CDD:293791 13/33 (39%)
WD40 repeat 846..880 CDD:293791 10/34 (29%)
WD40 847..>1073 CDD:475233 47/142 (33%)
WD40 repeat 886..918 CDD:293791 13/31 (42%)
WD40 repeat 931..969 CDD:293791 15/38 (39%)
WD40 repeat 1002..1037 CDD:293791
EML3XP_006718552.1 TD_EMAP-like 56..>87 CDD:425368
HELP 268..336 CDD:460922 31/69 (45%)
WD40 repeat 359..406 CDD:293791 19/46 (41%)
WD40 362..808 CDD:441893 154/463 (33%)
WD40 repeat 414..453 CDD:293791 14/38 (37%)
WD40 repeat 459..499 CDD:293791 9/39 (23%)
WD40 repeat 514..563 CDD:293791 15/48 (31%)
WD40 repeat 568..606 CDD:293791 13/43 (30%)
WD40 repeat 612..646 CDD:293791 13/40 (33%)
WD40 repeat 684..728 CDD:293791 12/43 (28%)
WD40 repeat 734..774 CDD:293791 13/39 (33%)
WD40 repeat 780..806 CDD:293791 13/25 (52%)
Blue background indicates that the domain is not in the aligned region.

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