DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DCX-EMAP and DCX-EMAP

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:XP_061502766.1 Gene:DCX-EMAP / 1271739 VectorBaseID:AGAMI1_012794 Length:1532 Species:Anopheles gambiae


Alignment Length:1120 Identity:771/1120 - (68%)
Similarity:882/1120 - (78%) Gaps:90/1120 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NAPLEGNVSPPPTQPHLD-DNLHNGN-----GNGNGIHSSSSNINKHGSNINGNNDSNRSSPAKS 65
            ::||.|...|....|.:. |.|.:|.     |.|.|   ......:.|..:      .|.|..:|
Mosquito   453 SSPLAGRRHPVHVNPVISRDKLASGGVSGGIGGGGG---GGWGPRQRGGPV------ERGSRIQS 508

  Fly    66 PKRPVSSSFRIQNTSRYDNDEEDLAASE------QVAGGDRQVPDYWQQRNGATTGATSGRQSRA 124
            |.....::......:..|...|..|.:.      ..|||.:|     ||:...|..:|.|....|
Mosquito   509 PATGTGTALPPGAGTSMDVGGEGAAGTPVAAGNGPAAGGQQQ-----QQQQPGTAASTPGAAGAA 568

  Fly   125 ISPGYLDNMSENSEQPPVVPLVRSKSRPEI---SSAAA--------------------SRYNNLS 166
            .:|               .|:.||:||.::   .||..                    |||:|||
Mosquito   569 PAP---------------APVKRSQSRNDVLDLDSAPGPSGLLPSNPGVPGTIGGNPQSRYSNLS 618

  Fly   167 YWKARRVVFYRNGDPFFPGVELRYRPGRDVTSLDNLLDKISPKMDLPRGARYVFSMDGDRKYHLD 231
            :||||||:|||||||||||||.|::||||:.:|:.||||||.:|||||||||:|||||||||.||
Mosquito   619 FWKARRVLFYRNGDPFFPGVEFRFKPGRDICTLEALLDKISARMDLPRGARYIFSMDGDRKYSLD 683

  Fly   232 ELEDGAFYVVSSFKAFKPASYGKKNGMWYASPGNQGWGS--KPA--SRKPSIMEADLGTLSTTSG 292
            |||||:.|||||||.|||||||||||:||||||||||||  .||  .||||:.|.|    :..||
Mosquito   684 ELEDGSSYVVSSFKVFKPASYGKKNGVWYASPGNQGWGSGAGPARLGRKPSVTEVD----NMPSG 744

  Fly   293 SIKRSAGRVIRIINNLDHSVQCRVLLNLRTSQPFEEVLEDLGQVLKINGAKKMYTGTGQEVRSFS 357
            |:|.||||||||||:.||||||||||||||||||||||||||||||:.|||||||..||||||||
Mosquito   745 SLKPSAGRVIRIINSHDHSVQCRVLLNLRTSQPFEEVLEDLGQVLKMIGAKKMYTSNGQEVRSFS 809

  Fly   358 QLRNEFADVDTFYL---------ATGTALIAGSPIRRSRSRPSVVAAAPILPTDELPKVPLRGAR 413
            |||||||:|:||||         |.|..:|..||.||||||  :..:.|    |:|.|...| .|
Mosquito   810 QLRNEFAEVETFYLSNTPSLPVGALGPGVIPPSPGRRSRSR--LGGSVP----DDLSKTTAR-QR 867

  Fly   414 PRSKSRPRILYAPESEILRPNGEYTMLDIMKEEPTKVTIRGLRRTFYPPVHHAPADNSPPDKKLQ 478
            .|||||||:|||||:|::|.:.:|.:||.||||||::||||||||||||:||.|.||:||||||.
Mosquito   868 ARSKSRPRVLYAPENELVRASSDYPLLDAMKEEPTRITIRGLRRTFYPPLHHPPIDNAPPDKKLS 932

  Fly   479 LQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIMCMDVHPSRELVA 543
            |.|||||||||::|||||||||||||||||||||:||:|||||||||||||||||:||||||||.
Mosquito   933 LFWVHGYRGIDSKRNLWVLPSGELLYYVAAVAVLYDREEDAQRHYTGHTEDIMCMEVHPSRELVG 997

  Fly   544 SGQKAGRDRKSQAHVRIWSTESLQTLYVFGMGELDSGVTAVAFSQLNGGSYILAVDSGRESILSV 608
            |||:||||||||||||||||||||||||||||||||||.|||||||||||||||||:||||||||
Mosquito   998 SGQRAGRDRKSQAHVRIWSTESLQTLYVFGMGELDSGVIAVAFSQLNGGSYILAVDAGRESILSV 1062

  Fly   609 WQWQWGHLLGKVATLQEGLSGAAFHPLDDNLIITHGRGHLAFWHRRKDGFFERTDIVKQPSRSHV 673
            ||||||||||||||||||:.||.||||||||:||||||||||||||||||||:|||:|.|||:.|
Mosquito  1063 WQWQWGHLLGKVATLQEGIWGATFHPLDDNLLITHGRGHLAFWHRRKDGFFEKTDIIKPPSRTFV 1127

  Fly   674 TSVQFEPDGDVITADSDGFITIYSVDSDGAYFVRTEFEAHNKGIGCLIMLGEGTLLSGGEKDRKI 738
            |.||||||||||||||||||||||||:|||||||.|||||||.|.||:||.||||:|||||||||
Mosquito  1128 TCVQFEPDGDVITADSDGFITIYSVDADGAYFVRMEFEAHNKAISCLVMLSEGTLISGGEKDRKI 1192

  Fly   739 AAWDSLQNYKKIADTKLPEAAGGVRTIYPQRPGRNDGNIYVGTTRNNILEGSLQRRFTQVVFGHG 803
            ||||||||||:|.|.||||:|||||:|||||||||||||||||||||||||||||||.||:||||
Mosquito  1193 AAWDSLQNYKRITDIKLPESAGGVRSIYPQRPGRNDGNIYVGTTRNNILEGSLQRRFNQVIFGHG 1257

  Fly   804 RQLWGLAAHPDDELYATAGHDKHVALWRKNKLIWTIQTGYECVALAFHPFG-TLAAGSTEGHLLV 867
            :.||.||||||||::||.||||:|||||:.|||||...|||.:||||||:| .|||||:||||:|
Mosquito  1258 KHLWALAAHPDDEVFATGGHDKYVALWRRQKLIWTTSVGYEIIALAFHPYGAALAAGSSEGHLIV 1322

  Fly   868 INCENGAVMLTLRVCGSPLNCVAYNQVGDMIAMGSQNGSIYLFRVSRDGFSYKKVNKIRGSQPLT 932
            ||.||||.|||:||||||||.|.:||||||||:|||||||||||||||||||||:||||||||||
Mosquito  1323 INAENGATMLTIRVCGSPLNAVEFNQVGDMIAIGSQNGSIYLFRVSRDGFSYKKINKIRGSQPLT 1387

  Fly   933 HLDWSMDGNFVQTVTIDFDLLFWDAKSLSPERSPIAMKDVKWLTNNCTVGFLVAGQWSNRYY-ST 996
            |||||.:|||:|:||:||||||||.||||||:||||||||||:|:||||||||||.|:|||| :.
Mosquito  1388 HLDWSSEGNFLQSVTVDFDLLFWDVKSLSPEKSPIAMKDVKWMTSNCTVGFLVAGLWNNRYYPAP 1452

  Fly   997 TNTIVATCSRSAAHDMLASGDAEGYLRLFRYPCISPRAEFHESKVYSGMLACVRFLCGDHTLITV 1061
            :|||:.|.:|:||.|::|:|||:|||||||||||:|||||.|:|||||.||.|:||.|:|:|:||
Mosquito  1453 SNTIITTTARTAAQDLVAAGDADGYLRLFRYPCITPRAEFTEAKVYSGTLAAVKFLYGNHSLVTV 1517

  Fly  1062 GGTDASLMVWDIVEE 1076
            ||||||||:|::.||
Mosquito  1518 GGTDASLMIWELTEE 1532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711 69/86 (80%)
DCX2_RP_like 300..372 CDD:340590 64/80 (80%)
HELP 449..515 CDD:460922 54/65 (83%)
WD40 520..562 CDD:459801 38/41 (93%)
WD40 repeat 530..573 CDD:293791 39/42 (93%)
WD40 548..959 CDD:441893 352/411 (86%)
WD40 repeat 582..624 CDD:293791 39/41 (95%)
WD40 repeat 627..664 CDD:293791 31/36 (86%)
WD40 repeat 673..712 CDD:293791 35/38 (92%)
WD40 repeat 718..801 CDD:293791 71/82 (87%)
WD40 repeat 806..838 CDD:293791 24/31 (77%)
WD40 repeat 846..880 CDD:293791 26/34 (76%)
WD40 847..>1073 CDD:475233 178/227 (78%)
WD40 repeat 886..918 CDD:293791 27/31 (87%)
WD40 repeat 931..969 CDD:293791 30/37 (81%)
WD40 repeat 1002..1037 CDD:293791 24/34 (71%)
DCX-EMAPXP_061502766.1 None

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