DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCX-EMAP and LOC101882676

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:NP_001430331.1 Gene:LOC101882676 / 101882676 -ID:- Length:2130 Species:Danio rerio


Alignment Length:909 Identity:170/909 - (18%)
Similarity:292/909 - (32%) Gaps:305/909 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 ATTGATSGRQSRAISPGYLDNMSENSEQPPVVPLVRSKSRPEISSAAASRYNNLSYWKARRVVFY 176
            :||....|... .:|||.:..:......|...|:.                       .:||.||
Zfish     2 STTSLNDGPHP-DLSPGSMQTLVSRPLLPQSDPIT-----------------------TKRVCFY 42

  Fly   177 RNGDPFFPGVELRYRPGRDVTSLDNLLDKISPKMDLPRGARYVFSMDGDRKY-HLDELEDGAFYV 240
            ::|||.|.|..:... .|...:.|.|||.:|.|:.||.|.|.:.:..|.... .||:::||..|:
Zfish    43 KSGDPQFTGHRMVIN-SRTFKTFDALLDALSKKVPLPFGVRTITTPRGTHAVCSLDDVQDGGSYL 106

  Fly   241 VSSFKAFKPASYG---KKNGMWYAS-PGNQGWGSKPASRKPSIMEADLGTLSTTSGSIKRSAGRV 301
            .|..|..||.:..   |:...|..: |.:.|   :.|.|:.....|....:||.  :||.|...|
Zfish   107 CSDQKKVKPFNLDEVHKRQVPWNTTRPVSAG---RQARRELVRQLAKRNQVSTR--TIKMSENTV 166

  Fly   302 I-------RIINNLDHSVQCRVLLNLRTSQPFEEVLEDLGQVLKINGAKKMYTGTGQEVRSFSQL 359
            :       .:..|.|.|::..::|:.|.:..||.:|:.|.|:::. ...|:||..|:.:...|.|
Zfish   167 VVRTPKRLTVYKNRDPSMKRVIVLHRRIAPTFEALLDYLSQMMQF-PVVKLYTEDGRRIEGLSAL 230

  Fly   360 RNEFADVDTFYLATGTALIAGS-PIR---RSRSRPSVVAAAPILPTD-----------ELPKVPL 409
                      .|.||..:.||: |.|   .:...|:.:.:.  :|::           :..|:| 
Zfish   231 ----------ILCTGIVVAAGNEPFRIGIYNLQAPTKIQSK--IPSESESLQQMETLLQEKKIP- 282

  Fly   410 RGARPRSK----SRPRILYAPESEILRPNGEYTMLDIMKEEPTKVTIRGLRRTFYPPVHHAPADN 470
            .|...||:    |..|.|....::.|  ||..|..:..|.|..:                  .:.
Zfish   283 SGTNSRSRNFSLSSERFLVEQINKSL--NGNLTEHNRTKNESME------------------TEG 327

  Fly   471 SPPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIMCMDV 535
            |.|....:::.......:: .||...:|:                ::|.::.:..:.:..|.:::
Zfish   328 SQPVGSDEMEACDYTEDVE-ERNCPTMPN----------------EDDIEKSFRVNEDGSMTVEM 375

  Fly   536 HPSRELVASGQKAGRDRKSQAHVRIWSTESLQTLYVFGMGELDSGVTAVAFSQLNGG--SYILAV 598
                               :.|:.|...|.:..........::|...||..|:...|  |..:..
Zfish   376 -------------------KVHLTIKQEEMIHWTTTLSRTSVNSQQRAVCNSKPESGANSVDITN 421

  Fly   599 DSGRESILSVWQWQWGHLLGKVATLQEGLSGAAFHPLDDNLIITHGRGHLAF------------- 650
            |||:||                       :|.  |.||...|.|.....:.|             
Zfish   422 DSGKES-----------------------NGP--HSLDSKEINTVPNKTVGFIKEERENYGSDTS 461

  Fly   651 ----------------WHRRKD----------------------GFFERTD---------IVKQP 668
                            ..|||:                      .:.|||.         :|.:.
Zfish   462 SEKPMPIYRRLPTPAPRQRRKEVSVENIKTVSETEVQESTVGAYSYMERTAQGELMEGYCVVSRS 526

  Fly   669 SRSHVTSV------------------QFEPDG--DVITADSDGFI-----TIYSVDSDGA---YF 705
            |.|...:|                  .|...|  :|:...::|.:     .::..:|.|.   |:
Zfish   527 SSSSTRTVSKPGKSESGEIKQKKSHSSFRSSGVAEVLQLQNNGTMGITETVVHIYESQGTCDNYY 591

  Fly   706 VRTEFEAHNKGIGCLIMLGE---------------------------GTLLSGGEKDRKIAAWDS 743
            ..|:.:..||...|...|.:                           ...|.||:.:....:.|.
Zfish   592 ANTQMDTDNKPGYCTKALPQSKPGSTDSGPCSSSNDCDVDLTRQSTSSNSLDGGKSNMLSLSSDR 656

  Fly   744 LQNYKKI--------ADTK--LPEAAGGV---RTIYPQRPGRNDGNIYVGTTRNNILEGSLQRRF 795
            ....|||        .|.|  |.|.....   :.::|.:. .|..|......:||..:....::.
Zfish   657 STPPKKINSNLSILTDDEKQSLVECTSETIQKKIMHPAKE-TNSSNKSTAVNKNNSPKSKKSKQS 720

  Fly   796 TQVVFGH-GRQLWGLAAHPDDELYATA------GHDK-----------HVALWRKNKLIWTIQT 841
            |...... |:.:.|.|.....:|..|:      |.:|           |.|:..|||...|.::
Zfish   721 TSSGSSRLGKNIKGSAPGSSKDLRVTSDTTSHTGSEKKTSSAESDKHEHKAVRDKNKKTKTFES 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711 30/87 (34%)
DCX2_RP_like 300..372 CDD:340590 17/78 (22%)
HELP 449..515 CDD:460922 5/65 (8%)
WD40 520..562 CDD:459801 3/41 (7%)
WD40 repeat 530..573 CDD:293791 4/42 (10%)
WD40 548..959 CDD:441893 73/442 (17%)
WD40 repeat 582..624 CDD:293791 10/43 (23%)
WD40 repeat 627..664 CDD:293791 13/96 (14%)
WD40 repeat 673..712 CDD:293791 9/66 (14%)
WD40 repeat 718..801 CDD:293791 19/122 (16%)
WD40 repeat 806..838 CDD:293791 11/48 (23%)
WD40 repeat 846..880 CDD:293791
WD40 847..>1073 CDD:475233
WD40 repeat 886..918 CDD:293791
WD40 repeat 931..969 CDD:293791
WD40 repeat 1002..1037 CDD:293791
LOC101882676NP_001430331.1 None
Blue background indicates that the domain is not in the aligned region.

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