DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCX-EMAP and eml2

DIOPT Version :10

Sequence 1:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster
Sequence 2:XP_031748248.1 Gene:eml2 / 100495318 XenbaseID:XB-GENE-977931 Length:860 Species:Xenopus tropicalis


Alignment Length:824 Identity:280/824 - (33%)
Similarity:416/824 - (50%) Gaps:112/824 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 RKPSIMEADLGTLSTTSGSIK-----RSAGRVIRIINNLDHSVQCRVLLNLRTSQPFEEVLEDLG 334
            :|||      |:|.:.||:.|     .|..:.:|::|      .|: |....||           
 Frog   125 KKPS------GSLPSPSGTKKDIVPLASKSKSVRLLN------ACK-LSKTATS----------- 165

  Fly   335 QVLKINGAKKMYTGTGQEVRSFSQLRNEFADVDTFYLATGTALIAGSPIRRSRSRPSVVAAAPIL 399
            .|.:.|..:::.:|    ||     |....|      |.|....|||....|..:.:        
 Frog   166 NVKRTNSTERISSG----VR-----RESSGD------AKGGRNRAGSTSSSSSGKKN-------- 207

  Fly   400 PTDELPKVPLRGARPRSKSRPRILYAPESEILRPNGEYTMLDIMKEEPTKVTIRGLRRTFYPP-- 462
             ::..||.|:..|..|     |:.:..|                 |...|:.:||...|.|.|  
 Frog   208 -SESKPKEPMFSAGKR-----RVTHCKE-----------------EGYVKMFLRGRPVTMYMPKE 249

  Fly   463 ---VHHAPADNSPPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYT 524
               .:...|....|.|||:|:||:||||.|.|.||::||:||.:|::|:|.||::.:|..|||||
 Frog   250 QVETYSLEAKGELPAKKLKLEWVYGYRGRDCRSNLYLLPTGETVYFIASVVVLYNVEEQLQRHYT 314

  Fly   525 GHTEDIMCMDVHPSRELVASGQKAGRDRKSQ---AHVRIWSTESLQTLYVFGMGELDSGVTAVAF 586
            |||:|:.|:.|||.:..:|:||.||..:..:   .|||||.:.:|.||:|.|||..|..||.|||
 Frog   315 GHTDDVKCLAVHPDKITIATGQVAGTSKDGKQLPPHVRIWDSVTLNTLHVIGMGFFDRAVTCVAF 379

  Fly   587 SQLNGGSYILAVDSGRESILSVWQWQWGHLLGKVATLQEGLSGAAFHPLDDNLIITHGRGHLAFW 651
            |:.|||..:.:||...:.:||||.||....|..|....|.:..|.|||.|.|:|:|.|:.||.||
 Frog   380 SKSNGGGNLCSVDDSNDHVLSVWDWQKEEKLADVKCSNEAVFVADFHPTDTNVIVTCGKSHLYFW 444

  Fly   652 H------RRKDGFFERTDIVKQPSRSHVTSVQFEPDGDVITADSDGFITIYSVDSDGAYFVRTEF 710
            .      .:|.|.||     ||.....|..|.|..:||.||.||.|.:.::...::  .......
 Frog   445 TLEGNSLNKKQGLFE-----KQEKPKFVLCVTFSENGDTITGDSSGNLLVWGKGTN--RITHAVQ 502

  Fly   711 EAHNKGIGCLIMLGEGTLLSGGEKDRKIAAWDSLQNYKKIADTKLPEAAGGVRTIYPQRPGRNDG 775
            .||:.||..|.|..:|||:||| ||||:.:||.  ||:::...::||..|.|||:   ..||.| 
 Frog   503 GAHDGGIFALCMQRDGTLVSGG-KDRKLVSWDG--NYQQLNKVEIPEQFGPVRTV---AEGRGD- 560

  Fly   776 NIYVGTTRNNILEGSLQRRFTQVVFGHGRQLWGLAAHPDDELYATAGHDKHVALW--RKNKLIWT 838
            .:.:|||||.:|:|:|...|..:..||..:|||||||.....:.|.|.||.:.||  ..::.|||
 Frog   561 VVLIGTTRNFVLQGTLSGEFNTITQGHTDELWGLAAHSLKPQFLTCGQDKQITLWDATSHRPIWT 625

  Fly   839 IQTGYECVALAFHPFGTLAA-GSTEGHLLVINCENGAVMLTLRVCGS-PLNCVAYNQVGDMIAMG 901
            ........:..|||.|::.| |:..|...|::.|. ..::|:...|: .|:.:.|:..|:.:|:|
 Frog   626 KIIEDPAQSSGFHPNGSVVAIGTLTGRWFVLDTET-KDLVTVHTDGNEQLSVMCYSPDGNFLAIG 689

  Fly   902 SQNGSIYLFRVSRDGFSYKKVNKIRG-SQPLTHLDWSMDGNFVQTVTIDFDLLFWDAKSLSPERS 965
            |.:..||::.|:.:|..|.::.|..| |..:||||||::..::.:.:.|:::|:|...:.....|
 Frog   690 SHDNYIYIYAVNENGRKYSRIGKCSGHSSFITHLDWSINSQYLMSNSGDYEILYWIPSACKQVVS 754

  Fly   966 PIAMKDVKWLTNNCTVGFLVAGQWSNRYYSTTNTIVATCSRSAAHDMLASGDAEGYLRLFRYPCI 1030
            ....:|::|:|:.||:||.|.|.|...  |....:.|.| ||....:||:||..|.:.||.:||.
 Frog   755 VETTRDIEWVTHTCTLGFQVFGVWPEG--SDGTDLNAIC-RSTDKKLLATGDDFGKVHLFSFPCS 816

  Fly  1031 SPRAEFHESKVYSGMLACVRFLCGDHTLITVGGTDASLMVWDIV 1074
            ..||..|....:|..:..|.||..|..||:.||.|.|:|.|..|
 Frog   817 QFRASGHAYGGHSSHVTNVSFLYDDRHLISTGGKDMSIMQWRAV 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711
DCX2_RP_like 300..372 CDD:340590 13/71 (18%)
HELP 449..515 CDD:460922 31/70 (44%)
WD40 520..562 CDD:459801 22/44 (50%)
WD40 repeat 530..573 CDD:293791 18/45 (40%)
WD40 548..959 CDD:441893 154/424 (36%)
WD40 repeat 582..624 CDD:293791 18/41 (44%)
WD40 repeat 627..664 CDD:293791 17/42 (40%)
WD40 repeat 673..712 CDD:293791 10/38 (26%)
WD40 repeat 718..801 CDD:293791 34/82 (41%)
WD40 repeat 806..838 CDD:293791 14/33 (42%)
WD40 repeat 846..880 CDD:293791 10/34 (29%)
WD40 847..>1073 CDD:475233 75/228 (33%)
WD40 repeat 886..918 CDD:293791 10/31 (32%)
WD40 repeat 931..969 CDD:293791 10/37 (27%)
WD40 repeat 1002..1037 CDD:293791 15/34 (44%)
eml2XP_031748248.1 TD_EMAP1 23..80 CDD:409268
HELP 234..305 CDD:460922 31/70 (44%)
WD40 299..744 CDD:441893 173/459 (38%)
WD40 repeat 321..369 CDD:293791 20/47 (43%)
WD40 repeat 374..414 CDD:293791 18/39 (46%)
WD40 repeat 420..462 CDD:293791 18/46 (39%)
WD40 repeat 468..501 CDD:293791 9/34 (26%)
WD40 repeat 509..584 CDD:293791 35/81 (43%)
WD40 repeat 592..627 CDD:293791 15/34 (44%)
WD40 repeat 673..714 CDD:293791 12/40 (30%)
WD40 repeat 720..744 CDD:293791 8/23 (35%)
WD40 repeat 787..824 CDD:293791 15/37 (41%)
Blue background indicates that the domain is not in the aligned region.

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