DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17839 and Myom2

DIOPT Version :10

Sequence 1:NP_996085.2 Gene:CG17839 / 39616 FlyBaseID:FBgn0036454 Length:1656 Species:Drosophila melanogaster
Sequence 2:XP_038950523.2 Gene:Myom2 / 306616 RGDID:631437 Length:1523 Species:Rattus norvegicus


Alignment Length:766 Identity:141/766 - (18%)
Similarity:241/766 - (31%) Gaps:301/766 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   772 EGTQNIPGPPEDVHATFVNQSSVSLAWTQPDVDNSNSSSSGNASPGDMITGDELAAGAVDPANAG 836
            ||...|||||.:|.|:.|:::.|.|:|..|             ||    .|.|.....::.:..|
  Rat   564 EGDVQIPGPPTNVQASEVSRNYVVLSWDPP-------------SP----RGKEPLMYFIEKSAVG 611

  Fly   837 KDVPNAGDATSGTTGTEDIEFIVQYGKVNNMTMYETVAKLENELTTNETSIDLTNLDANALYRIT 901
                      ||:           :.:||..|...:......:|...::            |...
  Rat   612 ----------SGS-----------WQRVNAQTAVRSPRYAVFDLAEGKS------------YVFR 643

  Fly   902 VVTRGKFGTSLPASMLLLNTTDQQRTGEAWGAPSPPHSLTVVAHSATWMQLTWQPPEYAHPHERI 966
            |::..|.|.|.|:.:     |...:..:....||.|..:....::.|.:.:.|..|:  |..:.:
  Rat   644 VLSANKHGLSDPSEI-----TPPIQAQDMIVVPSAPGRVLASRNTKTSVVVQWDRPK--HEEDLL 701

  Fly   967 TYRV-------------YHKAMRAEQFIKIETKLAWLRMNNLKPSSQHVLYVE---AVGERGDSL 1015
            .|.|             .||.:...:|:          ::.|....|::..|:   |||...:|.
  Rat   702 GYYVDCCVAGTNMWEPCNHKPIGYNRFV----------VHGLTTGEQYIFRVKAVNAVGTSENSQ 756

  Fly  1016 PSETL---VAWTDPALPAFVDPPTVHPADNIPEGGSMTILCLAFGNPAPTI---SLYVGGHLVRQ 1074
            .||.:   .|.|.|:.|..:   |:...|    |.|||:     |...|..   |..:|.:|.::
  Rat   757 ESEVIKVQAALTVPSHPYGI---TLLNCD----GHSMTL-----GWKVPKFSGGSAIIGYYLDKR 809

  Fly  1075 DASR---HMVTVIHNVSADMEHVSCYADNGYGVPMQATRRVNICYPPKIQAAGITVANIGDEIE- 1135
            :...   |.:    |.|...|.:         :.::.....:: |..||.|..:  |.||...: 
  Rat   810 EVHHKNWHEI----NSSPVKERI---------LTVEGLTEGSL-YEFKIAATNL--AGIGQPSDP 858

  Fly  1136 ---LRCTVDSKPAP---------------KTIFWREKDGRVPVINGGN----YFISVKANES--- 1175
               .:|...:.|.|               ..|.|     :.||.:|.:    ||:..|..:|   
  Rat   859 SEHFKCEAWTAPEPGPAYDLTFCEVRDTSLVILW-----KAPVYSGSSPVSGYFVDFKEEDSGEW 918

  Fly  1176 -------RPSIYTMSLRISKLQANDVGDYFCHADNPFGA-----TTTPVSVRIR-NTPALNHNVS 1227
                   .|:.|   |::..|.......:...|.|..|.     |:.||.|..| .|..::..|.
  Rat   919 KTTSEAATPNRY---LKVCDLHQGKTYVFRVRAVNASGPGKPSDTSEPVLVEARPGTKEISAGVD 980

  Fly  1228 ECCAAQNVSMACRSACSYYVDFDAIADRPECIVDFDKLMRCAADGSDHRSCCADEHVPRKCLNWC 1292
            |   ..|:          |:.||                             ..|........||
  Rat   981 E---EGNI----------YLGFD-----------------------------CQEMTDASQFTWC 1003

  Fly  1293 RGESVRSKEICSLQYARTIVGCFEKNRDRLPGPPENIVVSVVSDSEVNVRWDAPT---------K 1348
            :                    .:|:                ::|.|   |::..|         |
  Rat  1004 K--------------------AYEE----------------IADEE---RFEVHTEGDHSKLYFK 1029

  Fly  1349 NPNAVDGYRIFYHEAAILPPTSSSSSGSPSSDSGSSMENPGMDTLAAMNNATSMGNSNNAMAALE 1413
            ||:.:|           :...|.|.|.:....|...::...::.|.|::|               
  Rat  1030 NPDKID-----------IGTYSVSVSDTDGVSSSFVLDEEELERLMALSN--------------- 1068

  Fly  1414 IRRIDVKDTTISINGLKKDVLYELVVKAGNSYGASVLTDPIRFTLGEHHVT 1464
                ::|:.||.   ||.::.||:..|.           .:||.|...|::
  Rat  1069 ----EIKNPTIP---LKSELAYEIFDKG-----------QVRFWLQAEHLS 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17839NP_996085.2 Ig 33..116 CDD:472250
DB 185..278 CDD:460293
FN3 286..396 CDD:238020
DB 424..515 CDD:460293
FN3 524..613 CDD:238020
DB 631..>705 CDD:460293
FN3 773..>1036 CDD:442628 56/281 (20%)
FN3 934..1024 CDD:238020 22/108 (20%)
Ig 1029..1103 CDD:472250 16/79 (20%)
Ig strand B 1049..1053 CDD:409562 2/3 (67%)
Ig strand C 1062..1066 CDD:409562 1/6 (17%)
Ig strand E 1080..1083 CDD:409562 0/2 (0%)
Ig strand F 1093..1098 CDD:409562 0/4 (0%)
IG_like 1126..1216 CDD:214653 26/127 (20%)
Ig strand B 1134..1138 CDD:409390 0/7 (0%)
Ig strand C 1148..1152 CDD:409390 1/3 (33%)
Ig strand E 1182..1186 CDD:409390 1/3 (33%)
Ig strand F 1196..1201 CDD:409390 0/4 (0%)
Ig strand G 1209..1212 CDD:409390 0/2 (0%)
DB 1229..1315 CDD:460293 7/85 (8%)
FN3 1323..1457 CDD:238020 24/142 (17%)
Myom2XP_038950523.2 None
Blue background indicates that the domain is not in the aligned region.

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