DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17839 and Chl1

DIOPT Version :10

Sequence 1:NP_996085.2 Gene:CG17839 / 39616 FlyBaseID:FBgn0036454 Length:1656 Species:Drosophila melanogaster
Sequence 2:XP_006505530.1 Gene:Chl1 / 12661 MGIID:1098266 Length:1225 Species:Mus musculus


Alignment Length:1249 Identity:245/1249 - (19%)
Similarity:386/1249 - (30%) Gaps:438/1249 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 PLCA-GKLTSLDFSLFKCLR-----FMSEYNSCLFQGYGVLA---DPPSKLRTVAKTDSFVILDW 543
            |||. |.:.||.|.|.|...     .:.:..:.:.|.|..:|   |...::...||.:...|..|
Mouse     5 PLCGRGLILSLIFLLLKLSAAEIPLSVQQVPTIVKQSYVQVAFPFDEYFQIECEAKGNPEPIFSW 69

  Fly   544 ---NKPKRLADT------------------VSTYHVKFR-----RLGVGDDYLTVEKRQPPLILE 582
               :||..|:|.                  :|.:..|:|     |||.                 
Mouse    70 TKDDKPFDLSDPRIIAANNSGTFKIPNEGHISHFQGKYRCFASNRLGT----------------- 117

  Fly   583 GLESDIYYEFYVVSINAYGKSEASPRLITRTLPAEPVQQTAARYNMTTCCQASGLLPQCAPLCSY 647
            .:..:|  ||.|..:..:.|.:           .||:........:..|....||    .||..|
Mouse   118 AVSEEI--EFIVPGVPKFPKEK-----------IEPIDVEEGDSIVLPCNPPKGL----PPLHIY 165

  Fly   648 --NIRLSDI---ERLGPACRAQMPILARCAAGGRDHSPCCSRRGVINACMPLCRGV---MPLALT 704
              ||.|..|   ||:..:.|..: ..|........:..||.      |..|..|.:   ||:.||
Mouse   166 WMNIELEHIEQDERVYMSQRGDL-YFANVEENDSRNDYCCF------AAFPKLRTIVQKMPMKLT 223

  Fly   705 TKSSSASAAAAATSSSSGATAATSASATSNSNAAGAPSSSSSSASSGTSSNVPDCLSYAGNILQC 769
            ..    |...|:.||||     |...:.:||.....|......|..| |.:....|.....:|:|
Mouse   224 VN----SLKHASDSSSS-----TEICSQANSIKQRKPKLLLPPAQMG-SLSAKTVLKGDTLLLEC 278

  Fly   770 FEEGTQNIPGPPEDVHATFVNQSSVSLAWTQPDVDNSNSSSSGNASPGDMITGDELAAGAVDPAN 834
            |.||   :|.|              .:.|::|                                 
Mouse   279 FAEG---LPTP--------------HIQWSKP--------------------------------- 293

  Fly   835 AGKDVPNAGDATSGTTGTEDIEFIVQYGKVNNMTMYETVAKLENELTTNETSIDLTNLDANAL-- 897
             |.::|. |.||                    :.::|...|:||....:..:...|   ||.|  
Mouse   294 -GSELPE-GRAT--------------------IEVHEKTLKIENISYQDRGNYRCT---ANNLLG 333

  Fly   898 -----YRITVVTRGKFGTSLPASMLLLNTTDQQRTGEAWGAPSPP-----HSLTVVAHSATWMQL 952
                 :.:||....:: ...|.|.:....:......||.|.|.|.     :.|.:..|..     
Mouse   334 KASHDFHVTVEEPPRW-KKKPQSAVYSTGSSGILLCEAEGEPQPTIKWRLNGLPIEKHPF----- 392

  Fly   953 TWQPPEYAHPHERITYRVYHKAMRAEQFIKIETKLAWLRMNNLKPSSQHVLYVEAVGERGDSLPS 1017
               |.::..|.|                         :...||.|:...|...||....|..|.:
Mouse   393 ---PGDFMFPRE-------------------------ISFTNLLPNHTGVYQCEASNIHGTILAN 429

  Fly  1018 ETLVAWTDPALPAFVDPPTVHP------ADNIPE--GGSMTILCLAFGNPAPTISLYVGGHLVRQ 1074
                        |.:|...|.|      .:|...  |.|..:.|..|.:|..|:...|.......
Mouse   430 ------------ANIDVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPL 482

  Fly  1075 DASRH------MVTVIHNVSADMEHVSCYADNGYGVPMQATRRVNICYPPKIQAA----GITVAN 1129
            :..|:      .:.:......|....||:.||..|..: .|..::|....|::.:    .|..::
Mouse   483 EGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAV-ITANLDIRNATKLRVSPKNPRIPKSH 546

  Fly  1130 IGDEIELRC--TVDS--KPAPKTIFWREKDGRVPVINGGNYFISVKANESRPSIYTMSLRISKLQ 1190
            :   :||.|  ..||  |.:.| :.| .|||....:||        ..:.|..|....|.||.:.
Mouse   547 V---LELYCESQCDSHLKHSLK-LSW-SKDGEAFEMNG--------TEDGRIVIDGAYLTISNIT 598

  Fly  1191 ANDVGDYFCHADNPFGATTTPVSVRIRNT--PALNHNVSECCAAQNVSMACRSACSYYVDFDAIA 1253
            |.|.|.|.|.|.....:|:....|.:...  |..|.::||   .||.|:    ..|:....|..:
Mouse   599 AEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSE---RQNRSV----RLSWEAGDDHNS 656

  Fly  1254 DRPECIVDFDKLMRCAADGSDHRSCCADEHVPRKCLNWCRGESVRSKEICSL------QYARTIV 1312
            ...|.||:|:                .:...|.|.....|.:...:..:.||      |:..|.|
Mouse   657 KISEYIVEFE----------------GNREEPGKWEELTRVQGEETDVVLSLAPYVRYQFRVTAV 705

  Fly  1313 GCFEKNRDRLPGP------------PENIVVSVVSDSEVNVRWDAPTKN---------------- 1349
            ....::...||..            |:||.|......|:.::|: |.|:                
Mouse   706 NEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE-PLKSMEQNGPGLEYKVSWKP 769

  Fly  1350 ---PNAVDGYRIFYHEAAILPPTSSSS---SGSPSSDSGSSMENPGMDTLAAMNNATSMGNSNNA 1408
               |...:...:..|...::.||..:.   .....:..||| .:|...||.:..:..|       
Mouse   770 QGAPEEWEEEIVTNHTLRVMTPTVYAPYDVKVQAINQLGSS-PDPQPVTLYSGEDYPS------- 826

  Fly  1409 MAALEIRRIDVKDTTI-----------SINGL----------KKDVL------------------ 1434
             .|..|:|:||.::|:           :::||          .|.:|                  
Mouse   827 -TAPVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQR 890

  Fly  1435 -------------YELVVKAGNSYGASVLTDPIRFTLGEHHVTSATSSYSSAVGTISGI--VASI 1484
                         :.|.|.|.||.||...::|..|.                  |..|:  ..|.
Mouse   891 NSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYIFQ------------------TPEGVPEQPSF 937

  Fly  1485 LAILLA---AAAIVFYRRQRSSYG--KSANGNVA-------FENPTYTRG-LEQVQLPTVTSAIT 1536
            |.::..   .|.:        |:|  |..|||:.       ..|.||..| |.::.       :|
Mouse   938 LKVIKVDKDTATL--------SWGLPKKLNGNLTGYLLQYQIINDTYELGELNEIN-------VT 987

  Fly  1537 TQNGNHHGMSSSNN 1550
            |.:.:...:|:.|:
Mouse   988 TPSKSSWHLSNLNS 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17839NP_996085.2 Ig 33..116 CDD:472250
DB 185..278 CDD:460293
FN3 286..396 CDD:238020
DB 424..515 CDD:460293 9/32 (28%)
FN3 524..613 CDD:238020 20/114 (18%)
DB 631..>705 CDD:460293 22/81 (27%)
FN3 773..>1036 CDD:442628 42/274 (15%)
FN3 934..1024 CDD:238020 15/94 (16%)
Ig 1029..1103 CDD:472250 18/87 (21%)
Ig strand B 1049..1053 CDD:409562 0/3 (0%)
Ig strand C 1062..1066 CDD:409562 1/3 (33%)
Ig strand E 1080..1083 CDD:409562 0/2 (0%)
Ig strand F 1093..1098 CDD:409562 2/4 (50%)
IG_like 1126..1216 CDD:214653 26/93 (28%)
Ig strand B 1134..1138 CDD:409390 2/3 (67%)
Ig strand C 1148..1152 CDD:409390 0/3 (0%)
Ig strand E 1182..1186 CDD:409390 1/3 (33%)
Ig strand F 1196..1201 CDD:409390 2/4 (50%)
Ig strand G 1209..1212 CDD:409390 0/2 (0%)
DB 1229..1315 CDD:460293 17/91 (19%)
FN3 1323..1457 CDD:238020 38/219 (17%)
Chl1XP_006505530.1 Ig 35..126 CDD:472250 20/109 (18%)
Ig strand B 53..57 CDD:409396 0/3 (0%)
Ig strand C 66..70 CDD:409396 1/3 (33%)
Ig strand E 90..94 CDD:409396 0/3 (0%)
Ig strand F 106..111 CDD:409396 2/4 (50%)
Ig strand G 120..123 CDD:409396 0/2 (0%)
IgI_2_L1-CAM_like 135..225 CDD:409432 26/111 (23%)
Ig strand A 135..138 CDD:409432 1/13 (8%)
Ig strand A' 140..144 CDD:409432 1/3 (33%)
Ig strand B 147..155 CDD:409432 1/7 (14%)
Ig strand C 162..168 CDD:409432 2/5 (40%)
Ig strand C' 171..174 CDD:409432 1/2 (50%)
Ig strand D 180..184 CDD:409432 0/3 (0%)
Ig strand E 186..190 CDD:409432 0/4 (0%)
Ig strand F 201..209 CDD:409432 3/13 (23%)
Ig strand G 212..225 CDD:409432 5/12 (42%)
Ig 262..344 CDD:472250 25/156 (16%)
Ig strand B 274..278 CDD:409394 1/3 (33%)
Ig strand C 287..291 CDD:409394 0/3 (0%)
Ig strand E 309..313 CDD:409394 0/3 (0%)
Ig strand F 323..328 CDD:409394 1/7 (14%)
Ig strand G 336..339 CDD:409394 0/2 (0%)
Ig4_L1-NrCAM_like 348..435 CDD:409367 22/132 (17%)
Ig strand B 364..368 CDD:409367 0/3 (0%)
Ig strand C 377..381 CDD:409367 0/3 (0%)
Ig strand E 400..404 CDD:409367 1/28 (4%)
Ig strand F 414..419 CDD:409367 1/4 (25%)
Ig strand G 427..430 CDD:409367 1/14 (7%)
Ig 448..525 CDD:472250 16/77 (21%)
Ig strand B 457..461 CDD:409390 0/3 (0%)
Ig strand C 470..474 CDD:409390 1/3 (33%)
Ig strand E 493..497 CDD:409390 0/3 (0%)
Ig strand F 507..512 CDD:409390 2/4 (50%)
Ig strand G 520..523 CDD:409390 0/3 (0%)
IG_like 548..624 CDD:214653 26/85 (31%)
Ig strand B 548..552 CDD:409440 2/3 (67%)
Ig strand C 565..569 CDD:409440 2/5 (40%)
Ig strand E 588..594 CDD:409440 1/5 (20%)
FN3 <591..>868 CDD:442628 61/309 (20%)
Ig strand F 604..609 CDD:409440 2/4 (50%)
Ig strand G 617..620 CDD:409440 0/2 (0%)
FN3 628..717 CDD:238020 22/111 (20%)
FN3 833..927 CDD:238020 17/111 (15%)
FN3 932..1027 CDD:238020 18/85 (21%)
Bravo_FIGEY 1121..1206 CDD:464016
Blue background indicates that the domain is not in the aligned region.

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