DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17839 and myom3

DIOPT Version :10

Sequence 1:NP_996085.2 Gene:CG17839 / 39616 FlyBaseID:FBgn0036454 Length:1656 Species:Drosophila melanogaster
Sequence 2:XP_031752072.1 Gene:myom3 / 101734332 XenbaseID:XB-GENE-490325 Length:1443 Species:Xenopus tropicalis


Alignment Length:1230 Identity:224/1230 - (18%)
Similarity:355/1230 - (28%) Gaps:475/1230 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 IPSSPTFVTIENVSETSVTIGWTAP-DKLADRVSGYTINLTTLHSFDEDELSGEIVHRTASDSPE 348
            :|.:|..|...:::..||.:.||.| |.....|.||.:        ::.::|   :|:....:  
 Frog   368 VPGAPLCVRCYDINRDSVMLAWTPPSDDRGSHVIGYYV--------EKCDIS---IHQWTPCN-- 419

  Fly   349 SISLYSVPTNQTQLTLSNLSPLTMYAVIVTATNEFGSSLPT--------------ERLRFFTHTS 399
                 .|||...:|.:|.|:....|...|.|.|:.|.|||:              :||....:..
 Frog   420 -----EVPTKICRLPVSGLTEGNTYQFRVRAVNQAGISLPSKASQPVTMMDPAEKDRLIVIPYDE 479

  Fly   400 ASA-AESKAGTTDKQAMPQLPDTRQCCEDNGMTHRMCLDKMCDPQKTDQANLPDFMVCA-----P 458
            ..| ..|:....:...||..|......|.:.....:|.|   :|....:.:|..::..|     .
 Frog   480 QRAITVSRDDLQESVKMPLPPTNVHASEIHEDYIVLCWD---EPDPHGKESLFYYVEQAISGTNN 541

  Fly   459 WSNITFNCLANNIDHTPCCRARGIPSACFPLCAGKLTSLDFSLFKCLRFMSEYNSCLFQGYGV-- 521
            |..|......|:                 |.|:  |..||.:...|.|..|.      ..:||  
 Frog   542 WQRIMLETTLNS-----------------PRCS--LFHLDKNKSYCFRVRSA------NKFGVSS 581

  Fly   522 -------------LADPPSKLRTVA--KTDSFVILDWNKPKRLADTVSTYHVKFRRLGVGDDYLT 571
                         ||.||:....:|  .|:...::.|...:...|.:..|  .:.||...:::.|
 Frog   582 PSDPSEPISPKATLAIPPAPGHIIAFRDTNKSAVVQWQMVEDDPDILGYY--LYSRLSGEEEWQT 644

  Fly   572 VEKRQPPL-----ILEGLESDIYYEFYVVSINAYGKSEASPRLITRTLPAEPVQQTAARYNMTTC 631
            |..:  ||     .:..|::...|||.|.::|..|.||.||       |:||:..:.|.|     
 Frog   645 VNNK--PLKGTRFTVPELQTGKQYEFCVRAVNEAGLSERSP-------PSEPITISEAIY----- 695

  Fly   632 CQASGLLPQCAPLCSYNIRLSDIERLGPACRAQMPILARCAAGGRDHSPCCSRRGVINACMPLCR 696
                      .|...|...|                                          ||.
 Frog   696 ----------CPTAPYGFAL------------------------------------------LCC 708

  Fly   697 GVMPLALTTKSSSASAAAAATS------SSSGATAATSASATSNSNAAGAPSSSSS-----SASS 750
            |...:.::.|:...:|......      .|...|.....|..........|..:..     .|.:
 Frog   709 GKDEMTISWKAPKFTAGREVLGYFLDQHDSLEVTWQEVNSQPIPKRLCKVPDLTEGHFYEFRAKA 773

  Fly   751 GTSSNVPDCLSYAGNILQCFEEGTQNIPGPPEDVHATFVNQSSVSLAWTQP-------------- 801
            ..||.|.. :|...::.:| ||.|...||||.||.:|.|..:|:.|.|..|              
 Frog   774 LNSSGVGK-MSEPSDLFKC-EEWTMPEPGPPYDVRSTEVRNTSLMLQWEAPIYTGIGPVTGYIIE 836

  Fly   802 ------DVD----NSNSSSSGNASPGDMITGD--ELAAGAVDPANAGKDV----PNAGDATSGTT 850
                  .:|    |.|..:..:....|:.||.  ||....|:.|..|...    |...:...||.
 Frog   837 IREHGSGLDWKRINENIVADTHMRISDLETGKCYELRVLGVNAAGPGLPSLPCDPVVAETKPGTN 901

  Fly   851 GTE---DIEFIVQYGKVNNMTM----------YETVAKLE-NELTT--NETSIDLTNLDANAL-- 897
            ..|   |.|.::.....|...:          |:....|| .|::|  |.:.:.|||.....|  
 Frog   902 EIEVGVDEEGLIYLAFENPEPIDSPQFIWSKDYKGAPDLERTEISTDGNRSKLVLTNPSEKDLGT 966

  Fly   898 YRITVV-TRG--------------------------------------------------KFGTS 911
            |.:.|. |.|                                                  |....
 Frog   967 YAVEVPNTDGISASHILTEKELADLLRRSHDIKHPLIQLISGWNKEVLENGDVRLWLQVEKLSPD 1031

  Fly   912 LPASMLLLN-----------TTDQQR-----------------------------------TGE- 929
            ....|:..|           |.|::.                                   ||| 
 Frog  1032 AELEMIFNNKVIENTPERKITFDKENGLIEIIKEDFGEEDRGTYTAKLQDGKASNQFTVTLTGED 1096

  Fly   930 -------------AWGAPSPPHSLTVVAHSATWMQLTWQPPEYAHPHERITYRVYHKAMRAEQFI 981
                         ||.....||.:         .||.|:..|..  |..||.:|.:        .
 Frog  1097 FDKLQDESNSKCKAWKKKKGPHFV---------KQLQWKVTEEC--HVIITCKVTN--------T 1142

  Fly   982 KIETKLAWLRMNNLKPSSQHVLYVEAVGE-----------------------RGDSLPS------ 1017
            |.||.|.|.....|.|.   ||:.:..|:                       ||:....      
 Frog  1143 KKETTLTWSLNKKLLPD---VLFDDQSGDSKLVIKKFTSEQKGQYNAVVKDTRGEDSSDLDLTKE 1204

  Fly  1018 --------------------------ETLVAWTDPALPAFVD---PPTVH------PADNIPEGG 1047
                                      |.:..::|  :..|::   |...|      ..:.:..|.
 Frog  1205 GFEDIMKEICRISALSASPLKCQGTLEGIKIYSD--VKCFMESMNPVWYHKDKKLSSTERVKSGS 1267

  Fly  1048 SMTILCLAFGNPAP------TISLYVGGHLVRQDASRHMVTVIHNVSADMEHVSCYADNGYGVPM 1106
            ::..:.|...:|..      |:.|:.|     :|        ||..:.|:.          |...
 Frog  1268 TVNQVWLHITSPTESDKGQYTLELFDG-----KD--------IHKRTLDLS----------GKVF 1309

  Fly  1107 QATRRVNICYPPKIQAAGITVANIGDEIE---------------LRCTVDSKPAPKTIFWREKDG 1156
            :|.    :....|::.|.|...|....:.               |.|.:...|.|: :.|.:.|.
 Frog  1310 EAA----LAEHQKLKEAAIIEKNRAKVVRGLPDLATIMEDKTLCLTCHISGDPTPE-VSWVKNDK 1369

  Fly  1157 RVPVINGGNYFISVKANESRPSIYTMSLRISKLQANDVGDYFCHADNPFGATTTPVSVRI 1216
            .  |:....|.:.:|.     ::.||:  |.|:.|.|.|.|.....|.:|:....|:|.:
 Frog  1370 N--VVFKDRYKLDIKG-----TVVTMT--IEKICAEDSGRYSITVRNKYGSEVGQVTVSV 1420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17839NP_996085.2 Ig 33..116 CDD:472250
DB 185..278 CDD:460293
FN3 286..396 CDD:238020 30/124 (24%)
DB 424..515 CDD:460293 17/95 (18%)
FN3 524..613 CDD:238020 24/95 (25%)
DB 631..>705 CDD:460293 6/73 (8%)
FN3 773..>1036 CDD:442628 81/479 (17%)
FN3 934..1024 CDD:238020 23/144 (16%)
Ig 1029..1103 CDD:472250 13/88 (15%)
Ig strand B 1049..1053 CDD:409562 0/3 (0%)
Ig strand C 1062..1066 CDD:409562 1/3 (33%)
Ig strand E 1080..1083 CDD:409562 0/2 (0%)
Ig strand F 1093..1098 CDD:409562 0/4 (0%)
IG_like 1126..1216 CDD:214653 22/104 (21%)
Ig strand B 1134..1138 CDD:409390 1/18 (6%)
Ig strand C 1148..1152 CDD:409390 0/3 (0%)
Ig strand E 1182..1186 CDD:409390 1/3 (33%)
Ig strand F 1196..1201 CDD:409390 1/4 (25%)
Ig strand G 1209..1212 CDD:409390 0/2 (0%)
DB 1229..1315 CDD:460293
FN3 1323..1457 CDD:238020
myom3XP_031752072.1 BAR <15..>120 CDD:472257
Ig 136..230 CDD:472250
Ig strand B 153..157 CDD:409543
Ig strand C 166..170 CDD:409543
Ig strand E 195..199 CDD:409543
Ig strand F 209..214 CDD:409543
Ig strand G 222..225 CDD:409543
Ig 267..358 CDD:472250
Ig strand B 283..287 CDD:409353
Ig strand C 299..303 CDD:409353
Ig strand E 324..328 CDD:409353
Ig strand F 338..343 CDD:409353
Ig strand G 351..354 CDD:409353
FN3 369..462 CDD:238020 28/110 (25%)
FN3 <432..>704 CDD:442628 68/325 (21%)
FN3 697..786 CDD:238020 17/131 (13%)
FN3 799..896 CDD:238020 24/96 (25%)
Ig 926..983 CDD:409353 14/56 (25%)
Ig strand C 927..931 CDD:409353 0/3 (0%)
Ig strand E 952..956 CDD:409353 0/3 (0%)
Ig strand F 966..971 CDD:409353 1/4 (25%)
Ig strand G 980..983 CDD:409353 0/2 (0%)
Ig 1117..1202 CDD:472250 22/106 (21%)
Ig 1330..1420 CDD:472250 21/99 (21%)
Ig strand B 1348..1352 CDD:409353 1/3 (33%)
Ig strand C 1361..1365 CDD:409353 0/4 (0%)
Ig strand E 1386..1390 CDD:409353 2/5 (40%)
Ig strand F 1400..1405 CDD:409353 1/4 (25%)
Ig strand G 1413..1416 CDD:409353 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

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