DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Helz and zgc:154086

DIOPT Version :9

Sequence 1:NP_001261848.1 Gene:Helz / 39613 FlyBaseID:FBgn0036451 Length:2103 Species:Drosophila melanogaster
Sequence 2:NP_001070795.1 Gene:zgc:154086 / 768184 ZFINID:ZDB-GENE-061013-333 Length:1106 Species:Danio rerio


Alignment Length:963 Identity:229/963 - (23%)
Similarity:385/963 - (39%) Gaps:248/963 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 TEQVLDRWIQATAPERVMCERVPDMEARCEQQLVTSISSKTSKREWLFQ----LETKKPLKAVAL 444
            :.|.|..|       |.:|.......|:|.:|     ....:..:.|.|    |:..:..::|.|
Zfish   231 SSQSLYSW-------RALCMTPLQRSAQCSEQ-----KEPDADLQALLQEKGGLQVSQQNQSVCL 283

  Fly   445 L------------------QDAHR---------NHFALKSIKMC----------KPTESSMELKS 472
            |                  |...|         ..|:::|:..|          :..|..:::..
Zfish   284 LMGDCSELLIWVQNCGSERQQLQRCVCAGWDSAQQFSVRSVSRCEDGGTEAPPVRMLEEPLDIHP 348

  Fly   473 DQEWLAGSSSQSETSNEDSATLIHEITVEFHTEIYGTFRQAICFDVGQEPLLVRHL--CVDVLPV 535
            .|:........::|....|..|:    :.|.:...|. |..:.....:|.||...:  |....|.
Zfish   349 GQKMCVCVCCTAKTLGRSSELLL----LHFSSFTIGR-RLELSVSSVEEQLLNPSMPYCSPSAPA 408

  Fly   536 NDAEKIEEIKRDIINSSATRWDVANTQLTRFETTIGTHLKTEAYLSDLEHERELLERYPCPRAAT 600
            ...:.::.:   .:::..|...:....|..|   :|.:...:|....:|.::::|          
Zfish   409 QLPQPLQVL---TVSAPPTPLRLTRRHLPNF---LGNYGVPQALRECVEAQKDVL---------- 457

  Fly   601 FTLTQSTIVEKRLTQNNYRSRIHELLSVEEIARYEQIARYNVRTRLTVASNYILTPAGMATSTAK 665
              :.|..:.| .|:......|...||.:||:....:|                          .:
Zfish   458 --VVQPALAE-ALSLRTMLPRFSALLWLEELQAEREI--------------------------RE 493

  Fly   666 YSLAGELFALMRLGKDISEDTSPGRLILSNCSSVYISKP---EDPDSKADPTKRAVYEALIEDKG 727
            :||.|   |::|.|........||  :.....|::|...   :.|.|.....:...|...|.|  
Zfish   494 FSLTG---AILRRGAVYLHLEVPG--LAEGRPSLFIGDKVVLKKPCSGGVVIEYIAYVTEISD-- 551

  Fly   728 KNVIYLKLSAKCVEAMALQADTELE-------VDIQFQLNRMPYCEWHNAVDKITDF--RLIFPA 783
                         |.::|:.:.|.:       :|::|..||:.....|.|:::...|  .::||:
Zfish   552 -------------EDVSLRVNAEFQSSYLGEPLDVEFSFNRLTMRRCHCALEQSKHFGENILFPS 603

  Fly   784 TELEPSIP-----WTPKKQWADSCE---------------------------------------- 803
            . |:...|     |.|:::..:..:                                        
Zfish   604 M-LQLQAPQWSGEWGPQEEQDEELKDGEQTQTVTGSALTAEMVSVATQTKTDLSVTEKRIPNPGQ 667

  Fly   804 ---PKLNAKQREAVNAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLTQPE-AKILICTHSN 864
               |.|||.|::||..|.:..| :..|.:|.||.|||||.||.:||.|:..:.. :::|:||.||
Zfish   668 FFNPDLNAAQKQAVRRILSGES-RPTPYVLFGPPGTGKTITLIEAILQVHHRISCSRVLVCTPSN 731

  Fly   865 SAADLYIKEYLHPWIEEGLKEATPLRVYYHKRWSATVNGVVQ-KYCITDGVGNFLRPTVEDIMR- 927
            |||||......|..             :.|....|.||...: :..:::.:..:.| ..|||.. 
Zfish   732 SAADLICMRLHHSG-------------FLHSASLARVNATCRPEESMSEELRQYAR-AGEDIRHA 782

  Fly   928 --HRIVVVTLSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALAND-STRIVLAGDHMQM 989
              |||||.|.|.:.....:||..|.|||:|:|||.||.|.|.::||:|.:: |.:||||||..|:
Zfish   783 SFHRIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQL 847

  Fly   990 SPELFSAFAKERKLHISLLERLYDHYPSNFPC-----------KILLCENYRAHEAIIRFTSELF 1043
            .|.:.|..|....|.:||||||..:  |.:.|           |:|.  |||:|||::...|.||
Zfish   848 GPVVKSRLASVFGLGVSLLERLMGN--SLYACGERGFNPLLVTKLLY--NYRSHEALLDLPSRLF 908

  Fly  1044 YEQKLVASGKQPRHD----------RFYPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELR 1098
            |..:|....::...|          |.:||.|...||.::::..:.:::|.||..:|:....:|.
Zfish   909 YAGELCVRAQRAAVDSLCHWNKLPTRGFPLIFHGVRGSEMREGCNPSWFNPAEAVQVMMYCCQLA 973

  Fly  1099 KRWPSAWGKLNDTSIGIMTPYSDQVFRIRSELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRR 1163
            ||   .:..::...||::.||..||.:||..|::..:|.:.|..|...||::|..:.|||||:..
Zfish   974 KR---LYNPISAADIGVIAPYRKQVEKIRVLLQRVGLGEVKVGSVEEFQGQEFLIMILSTVRSNE 1035

  Fly  1164 TCMPQGSAPGSASTTSIGDADADYGFLSNSKLLNTAITRAQSLVAVVGDPVAL 1216
            :.:.:             :.....|||||.|..|.|||||::|:.|:|:|..|
Zfish  1036 SLLNE-------------ELQCMLGFLSNPKRFNVAITRAKALLIVIGNPHVL 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HelzNP_001261848.1 zf-CCCH 329..353 CDD:279036
TIGR00376 657..1236 CDD:273041 181/647 (28%)
AAA 810..>886 CDD:99707 30/76 (39%)
AAA_12 1003..1213 CDD:289832 71/230 (31%)
zgc:154086NP_001070795.1 S1-like 45..97 CDD:291136
AAA_11 672..854 CDD:289831 74/196 (38%)
P-loop_NTPase 673..>850 CDD:304359 73/191 (38%)
AAA_12 861..1072 CDD:289832 71/230 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148890at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.