DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Helz and Mov10

DIOPT Version :9

Sequence 1:NP_001261848.1 Gene:Helz / 39613 FlyBaseID:FBgn0036451 Length:2103 Species:Drosophila melanogaster
Sequence 2:NP_001101181.1 Gene:Mov10 / 310756 RGDID:1598327 Length:1004 Species:Rattus norvegicus


Alignment Length:899 Identity:231/899 - (25%)
Similarity:370/899 - (41%) Gaps:194/899 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 HEITVEFHTEIYGTFRQAICFDV---------GQEPLLVRH---------LCVDVLPVNDAEKIE 542
            :|:.|...|.|.|.|...:.:::         |.|...:..         |...:.|....::..
  Rat   196 YELHVYCKTSIVGYFPATVLWELLGPGESGAEGAETFYIARFLAAVAHSPLAAQLKPTTPFKRPP 260

  Fly   543 EIKRDIINSS----ATRWDVANTQLTRFETTIGTH---LKTEAYLSDLEHERELLERYPCPRAAT 600
            .:.|:.::::    ..|.|.|..........:||:   ::....|..|.....:   :..|:...
  Rat   261 RLTRNPVSTNRIEEGERPDRAKGYELELSLALGTYYPPIRLRQLLPTLLQGPSI---FTSPKEVA 322

  Fly   601 FTLTQSTIVEKRLTQNNYRSRIHELLSVEEIARYEQIARYNVRT------------RLTVASNYI 653
            ....|   :|..|...||..::..||.:||:.....|..|::.:            ||..     
  Rat   323 EIKAQ---LETTLKSRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPVDQNPRLLT----- 379

  Fly   654 LTPAGMATSTAKYSLAGELFALMRLGKDISEDTSPGRLILSNCSSVYISKPEDPDSKADPTKRAV 718
            |...|:..|.........||||  |..:|.:                    |||         ..
  Rat   380 LEVPGVTESRPSVLRGDHLFAL--LSSEIQQ--------------------EDP---------VT 413

  Fly   719 YEALIE----DKGKNVIYLKLSAKCVEAMALQADTELEVDIQFQLNRMPYCEWHNAVDKITDFRL 779
            |:..:.    |:.|......|.::.|:.:..:        :.|..||.|....|.|::....:.|
  Rat   414 YKGFVHKVELDRVKLSFSPSLLSRFVDGLTFK--------VNFTFNRQPLRVQHRALELTGRWVL 470

  Fly   780 ---IFPATELEPS-IPWTPK-KQWADSCEPKLNAKQREAVNAITTALSIKLPPILLIGPFGTGKT 839
               :||......| :|...| |.:..|.|.  |.:|.:|:..|... :.:..|.::.||.|||||
  Rat   471 WPTLFPVASRGVSLLPSDVKFKLYDRSLES--NPEQLQAMKHIVRG-TTRPAPYIIFGPPGTGKT 532

  Fly   840 YTLAQAIKQLLTQ-PEAKILICTHSNSAADLYIKEYLHPWIEEGLKEATPLRVYYHKRWSATVNG 903
            .||.:||||::.. |:|.||.||.|||.|||..:.         |:...|..:|.....|..:..
  Rat   533 VTLVEAIKQVVKHLPKAHILACTPSNSGADLLCQR---------LRVHLPSSIYRLLAPSRDIRM 588

  Fly   904 V---VQKYCITD-GVGNFLRPTVEDIMRHRIVVVTLSISMELATLGLPKGLFTHIFLDEAAQAME 964
            |   ::..|..| ..|.::.|..:.:.::|:::.||..:..|.:...|...|||||:|||...||
  Rat   589 VPEDIKTCCNWDPKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHCME 653

  Fly   965 CEAIMPLA-------LANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLERLYDH-------- 1014
            .|:::.:|       ..|...::|||||..|:.|.|.|..|::..|..||||||..:        
  Rat   654 PESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGP 718

  Fly  1015 --YPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLVASGKQPRHDRF----------YPLTFFT 1067
              |...|..|:|  .|||:|..|:...::|:|:.:|.|.......:||          :|:.|..
  Rat   719 NGYDPQFITKLL--RNYRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHG 781

  Fly  1068 TRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSA---WGKLNDTSIGIMTPYSDQVFRIRSE 1129
            ..|:|.::.||.:|:|..|...|...:.:|..  ||:   ..:|:..|:|:::||..||.:||..
  Rat   782 VMGKDEREGNSPSFFNPEEAATVTSYLRQLLA--PSSKKGKARLSPRSVGVISPYRKQVEKIRYC 844

  Fly  1130 LRK--RRMGG------ISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTSIGDADAD 1186
            :.|  |.:.|      :.|..|...||::...:.:||||:            |.|...: |.|.:
  Rat   845 ITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRS------------SQSFVQL-DLDFN 896

  Fly  1187 YGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDEHKSLFGLTWSNLRSQL 1251
            .|||.|.|..|.|:|||::|:.|||:|:.|   |. ...|:.|:|.|.|:.   |.|.....::|
  Rat   897 LGFLKNPKRFNVAVTRAKALLIVVGNPLLL---GH-DPDWKTFLEFCKENG---GYTGCPFPAKL 954

  Fly  1252 D---GVELKRGYVLNPLAPEFV-PRALQPEAYLREQAALYLNGPQHGHGGHGPP 1301
            |   |.:|.:|  |:.|:|... ||        |.|..     ||...|..|.|
  Rat   955 DLQQGQDLLQG--LSKLSPSTSGPR--------RHQRL-----PQEREGEEGLP 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HelzNP_001261848.1 zf-CCCH 329..353 CDD:279036
TIGR00376 657..1236 CDD:273041 178/630 (28%)
AAA 810..>886 CDD:99707 30/76 (39%)
AAA_12 1003..1213 CDD:289832 73/240 (30%)
Mov10NP_001101181.1 DEXXQc_Helz-like 499..734 CDD:350796 80/248 (32%)
SF1_C_Upf1 735..940 CDD:350195 65/223 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148890at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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