DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Helz and Mov10l1

DIOPT Version :9

Sequence 1:NP_001261848.1 Gene:Helz / 39613 FlyBaseID:FBgn0036451 Length:2103 Species:Drosophila melanogaster
Sequence 2:XP_017450774.2 Gene:Mov10l1 / 300141 RGDID:1304735 Length:1291 Species:Rattus norvegicus


Alignment Length:1208 Identity:275/1208 - (22%)
Similarity:448/1208 - (37%) Gaps:396/1208 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 GY-TLDTY----SLCETFSEAHICHYGAQCVEAHGQDELNEWKERF----EYRRMRMQKACEKEL 378
            || :..||    |:||.|   |.|.  ...|||........|....    ..|..|:.|.|...|
  Rat   133 GYISQTTYFSLESVCEGF---HPCK--GDWVEAEYWIRPGTWSSEAISVKPLRYKRVDKVCISSL 192

  Fly   379 YGKSYTEQVLDRWIQATAPERVMCERVPDMEARCEQQLVTSISSKTSKREWLFQLETKKPLKAVA 443
            .|::   .|::..|..:....    ::|:........:|.::..::|:..::::.....|:|..|
  Rat   193 CGRN---GVIEDSIFFSLDSL----KLPEGYTPRRHDIVNAVVVESSQSCYIWRALCMTPVKREA 250

  Fly   444 LLQDAHRNHFA---LKS---IKMCKPT---------------------ESSMELKSDQEWLAG-- 479
            ::.:|.:..:.   ||:   :::.:.|                     |.|.:|.|.:  |||  
  Rat   251 IIGEAPQEPYGALLLKNKGDVEVTRTTSFGTLKEGESKAVVIWIENKGEISQDLVSCR--LAGWD 313

  Fly   480 ----------------------SSSQSETSN------EDSATLIHEITVEFHTEIY--------- 507
                                  :.|:.|..|      ||....|.|.::|.:|||.         
  Rat   314 KAHQFRFEAQGRGQACAGVAAVAVSEGENVNSLNHHREDKPDPIPESSLENNTEISPDGCACTEE 378

  Fly   508 ------------------------------------GTFRQ--AICFDVGQEPLLVRHLCVDVLP 534
                                                |..::  .:||   ...|:.|||.|:|  
  Rat   379 SREKGDTAEKQEPEPGGLIPPGEKTSIVVTCNAKNPGRCKELLLLCF---SNFLIGRHLEVNV-- 438

  Fly   535 VNDAEKIEEIKRDIINSSATRWDVANTQLTRFETTIGTHLKTEAYLSDLEHEREL---LERYP-- 594
            |:..|.:..::...   |..:...:.|.::...|.:.|..|..:       .|:|   |.:||  
  Rat   439 VSSEEALIAVREPF---SWKKPKSSQTIVSAKTTVVVTTQKRNS-------RRQLPSFLPQYPIP 493

  Fly   595 -----CPRAATFTLTQSTIVEKRLTQNNYRSRIHELLSVEEIARYEQIARYNVRTRLTVASN--Y 652
                 |.......||...::.:.|..:||:.:...||.:|||....::..||:...:.....  .
  Rat   494 DRLKKCVEQKIDILTFQPLLAELLNMSNYKEKFSTLLWLEEIHAEIELKEYNMSGVVLKRKGELL 558

  Fly   653 ILTPAGMATSTAKYSL-AGELFALMR----------LG-------KDISEDTSPGRLILSNCSSV 699
            :|...|:|.|  :.|| ||:...|..          :|       :|::...:||      ...:
  Rat   559 VLEVPGLAES--RPSLYAGDKLILKSQEYNGHVIEYIGYVMEIHEEDVTLKLNPG------FEQM 615

  Fly   700 YISKPEDPDSKAD-PTKRAVYEALIEDKGKNVIYLKLSAKCVEAMALQA-----------DTELE 752
            |..:|.|.:...: .|.|..:.||     :.||:|.:.....|.:.||:           ||:.:
  Rat   616 YNFEPMDVEFTYNRTTSRRCHYAL-----EQVIHLGVKVLFPEEIILQSPQVTGNWSLAQDTKSD 675

  Fly   753 VDIQFQLNRMPYCEWHN------------------------------------------------ 769
            .....::.|.......|                                                
  Rat   676 GQSITKVTRNDGQSITNITKNDGQSITNITKNDGQSITKVTKNDGQSITNITKNDGQSITSITKN 740

  Fly   770 ---AVDKIT-------------DFRLIFPATEL-------------------------------- 786
               :::|:|             |.:.|...|:.                                
  Rat   741 GGQSINKVTRNDGQSITNITRNDGQSITKVTKNGGQSISKVTRNDGQSITKNKKTVKDQTKNTTK 805

  Fly   787 ---------------------EPSIPWTPKKQWADSCEPKLNAKQREAVNAITTALSIKLPPILL 830
                                 |..||....|::.:   |.||..|:.||..|.:. ..:..|.:|
  Rat   806 ERHLSTTDQPEKTASTAETMDEIQIPRARDKEFFN---PVLNENQKLAVRRILSG-DCRPLPYIL 866

  Fly   831 IGPFGTGKTYTLAQAIKQL-LTQPEAKILICTHSNSAADLYIKEYLHPWIEEGLKEATPLRVYYH 894
            .||.|||||.|:.:|:.|: ...|:::||:|..|||||||.... ||.  .:.||.|..:||...
  Rat   867 FGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNSAADLVCLR-LHE--SKVLKPAAMVRVNAT 928

  Fly   895 KRWSATVNGVVQKYCITDGVGNFLRPTVEDI---MRHRIVVVTLSISMELATLGLPKGLFTHIFL 956
            .|:..|:...::.|| .||         |||   .|.||::.|.|.:.....:|:..|.|||:|:
  Rat   929 CRFEETIIEAIKPYC-RDG---------EDIWRASRFRIIITTCSSAGLFYQIGVRVGYFTHVFV 983

  Fly   957 DEAAQAMECEAIMPLALAND-STRIVLAGDHMQMSPELFSAFAKERKLHISLLERLYDH------ 1014
            |||.||.|.|.::||.|.:| :.:||||||.||:.|.:.|..|....|::|:||||...      
  Rat   984 DEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRD 1048

  Fly  1015 ---------------YPSNFPCKILLCENYRAHEAIIRFTSELFY--------EQKLVAS----G 1052
                           .|::.|....|.:|||:|.|::...|.|||        :.|:|.|    .
  Rat  1049 ENAFGACGAYNPLLPLPASSPQVTKLVKNYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWE 1113

  Fly  1053 KQPRHDRFYPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMT 1117
            |.||  :.:||.|...||.:.::..|.::::.||..:|:.....|.:...|   :::...||::|
  Rat  1114 KLPR--KGFPLIFHGVRGNEAREGRSPSWFSPAEAVQVMRYCCLLARNVSS---QVSSKDIGVIT 1173

  Fly  1118 PYSDQVFRIRSELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTSIGD 1182
            ||..||.:|:..||...:..|.|..|...||:::..:.:||||:..                  |
  Rat  1174 PYRKQVEKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNE------------------D 1220

  Fly  1183 ADAD----YGFLSNSKLLNTAITRAQSLVAVVGDPVAL 1216
            ...|    .|||||||..|.||||.::|:.|:|:|..|
  Rat  1221 RFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVL 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HelzNP_001261848.1 zf-CCCH 329..353 CDD:279036 10/27 (37%)
TIGR00376 657..1236 CDD:273041 190/749 (25%)
AAA 810..>886 CDD:99707 31/76 (41%)
AAA_12 1003..1213 CDD:289832 71/246 (29%)
Mov10l1XP_017450774.2 PRK08581 657..>833 CDD:236304 14/175 (8%)
DEXXQc_Mov10L1 842..1079 CDD:350836 88/250 (35%)
SF1_C_Upf1 1080..1270 CDD:350195 61/202 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148890at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10887
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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