DRSC/TRiP Functional Genomics Resources

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Protein Alignment bmm and pnpla3

DIOPT Version :9

Sequence 1:NP_001163445.1 Gene:bmm / 39611 FlyBaseID:FBgn0036449 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001002338.1 Gene:pnpla3 / 436610 ZFINID:ZDB-GENE-040718-27 Length:473 Species:Danio rerio


Alignment Length:374 Identity:153/374 - (40%)
Similarity:216/374 - (57%) Gaps:22/374 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NLSFAGCGFLGIYHVGVAVCFKKYAPHLL--LEKIGGASAGSLAACCLLCDLPLGSMTSDFFRVV 64
            ||||||||||||||:|||.|..:.||:|:  ..||.|||||:|.|..|..:..:.....|...|.
Zfish     9 NLSFAGCGFLGIYHIGVASCLLEQAPYLIRGATKIYGASAGALTASVLTTEACIEKCCEDVINVA 73

  Fly    65 NEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVIISEFESREEV 129
            .|||:.:|||..|:|||...:..||.:.||.:||...:|||.:|||||.||:||::|:|.|:||:
Zfish    74 KEARKRNLGPLHPTFNIVKVIRGGLYRDLPSNAHTLSSGRLCVSLTRVMDGQNVLVSDFSSKEEL 138

  Fly   130 LQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLPILD-ENTITVSPFCGESDICPRDQSSQLF 193
            :|||:|:||||.:.|::||.||||||:||..|||||..: :||||||||.|||||||:|.|:...
Zfish   139 IQALICSCFIPVYCGLIPPAFRGVRYVDGGISDNLPQSELKNTITVSPFSGESDICPKDNSTSFH 203

  Fly   194 HLNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNLINCRRCVAVQSTFV 258
            .|.:.||||:.:..|..|..:.||||.|:.|::.||.|:.|||:||..|||:.. .|..|....:
Zfish   204 ELRFTNTSIQFNLDNAYRLSKALFPPEPKVLAEMCQSGYKDALRFLQENNLLQA-ACPGVDMALI 267

  Fly   259 -VSETVAQPQEFDPECRE------------CKKHR---KDALSSNMPQTVLDVIQDYIEQANKGL 307
             .:.|...|.:.:|...|            .:||.   .:.:..|:|..:..|..|...:.:..|
Zfish   268 QATPTCCCPGKKNPVVEETTKEWVLRRLRLLRKHHWWLDEQIVDNLPTPIKKVFCDACREKHGLL 332

  Fly   308 A--NWIFKHRGIKLLSLPATVPMDFLLATISKISALTPKLTKQARVMVE 354
            |  ..:...|....:.||.|:|::...:...:.....|::....|.:.|
Zfish   333 AQVTGLLPVRVASYMLLPYTLPVESAYSAAQRFWEWIPEVPADVRWLTE 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bmmNP_001163445.1 Pat_iPLA2 1..245 CDD:132857 130/245 (53%)
pnpla3NP_001002338.1 Pat_PNPLA2 4..252 CDD:132859 128/242 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 183 1.000 Domainoid score I3372
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H120056
Inparanoid 1 1.050 274 1.000 Inparanoid score I2940
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204225at2759
OrthoFinder 1 1.000 - - FOG0000670
OrthoInspector 1 1.000 - - mtm6600
orthoMCL 1 0.900 - - OOG6_103947
Panther 1 1.100 - - LDO PTHR12406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1585
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.970

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