DRSC/TRiP Functional Genomics Resources

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Protein Alignment bmm and Pnpla1

DIOPT Version :9

Sequence 1:NP_001163445.1 Gene:bmm / 39611 FlyBaseID:FBgn0036449 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001178770.1 Gene:Pnpla1 / 361812 RGDID:1306685 Length:589 Species:Rattus norvegicus


Alignment Length:320 Identity:110/320 - (34%)
Similarity:173/320 - (54%) Gaps:37/320 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NLSFAGCGFLGIYHVGVAVCFKKYAPHLL--LEKIGGASAGSLAACCLLCDLPLGSMTSDFFRVV 64
            ::||:|.|||..|..|.....:..||.:|  ..:..|.|||::.|..::|.:.:    .::.||:
  Rat    15 SISFSGSGFLSYYQAGAVDALRDLAPRMLDTAHRFAGTSAGAVIAALVICGIEM----EEYLRVL 75

  Fly    65 N----EARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVIISEFES 125
            |    |.:::.|||.|||..:...:.:.|...||:|::|...|:||:|||||.||:||::||:.|
  Rat    76 NMGLAEVKKFFLGPLSPSCKMVQMMRQFLYDVLPEDSYKAATGKLHVSLTRVTDGENVVVSEYRS 140

  Fly   126 REEVLQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLP-ILDENTITVSPFCGESDICPRDQS 189
            :||:::||.|:||:|.:.|.:||.:||.||:||.|:...| ....::||:|.|..:.|||||| .
  Rat   141 KEELIEALYCSCFVPVYCGFIPPTYRGERYIDGGFTSMQPCAFWTDSITISTFSSQQDICPRD-C 204

  Fly   190 SQLFH-LNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNL--------- 244
            ..:|| ....|.|.:.|.:||.|....||||....|.::..:|:|||:.:|.|.|.         
  Rat   205 PAIFHDFRMFNFSFQFSLENITRMTHALFPPDLVILQEYYYRGYDDAVSYLRRLNAAYLDSPSKR 269

  Fly   245 -------INCRRCVAVQSTFVVSETVAQPQEFD-PE-CRE------CKKHRKDALSSNMP 289
                   :.|:..||:......:...:.|.:.| || |.:      .|:.|||:.|...|
  Rat   270 VIFPRVEVYCQIEVALGHEPPPTSLQSLPAQRDSPEDCSQTHVQGALKEDRKDSHSPATP 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bmmNP_001163445.1 Pat_iPLA2 1..245 CDD:132857 96/266 (36%)
Pnpla1NP_001178770.1 Patatin_and_cPLA2 3..373 CDD:299702 110/320 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204225at2759
OrthoFinder 1 1.000 - - FOG0000670
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12406
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

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