DRSC/TRiP Functional Genomics Resources

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Protein Alignment bmm and Pnpla2

DIOPT Version :9

Sequence 1:NP_001163445.1 Gene:bmm / 39611 FlyBaseID:FBgn0036449 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001101979.2 Gene:Pnpla2 / 361676 RGDID:1309044 Length:478 Species:Rattus norvegicus


Alignment Length:366 Identity:150/366 - (40%)
Similarity:219/366 - (59%) Gaps:25/366 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NLSFAGCGFLGIYHVGVAVCFKKYAPHLLLE--KIGGASAGSLAACCLLCDLPLGSMTSDFFRVV 64
            |:|||||||||:||:|||.|.:::||.|:..  .|.|||||:|.|..|:....||...::...|.
  Rat     9 NISFAGCGFLGVYHIGVASCLREHAPFLVANATHIYGASAGALTATALVTGACLGEAGANIIEVS 73

  Fly    65 NEARRYSLGPFSPSFN----IQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVIISEFES 125
            .|||:..|||..||||    |:.|||    |.||.|.|.|.:|||.||||||.||:|||||.|.|
  Rat    74 KEARKRFLGPLHPSFNLVKTIRGCLL----KTLPADCHTRASGRLGISLTRVSDGENVIISHFSS 134

  Fly   126 REEVLQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLPILD-ENTITVSPFCGESDICPRDQS 189
            ::|::||.:|:.|||.:.|::||..:||||:||..|||||:.: :||||||||.|||||||:|.|
  Rat   135 KDELIQANVCSTFIPVYCGLIPPTLQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQDSS 199

  Fly   190 SQLFHLNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNLINCRRCVAVQ 254
            :.:..|...||||:.:.:|:.|..:.||||.|..|.:.|:||:.|.|:||.||.|:|       |
  Rat   200 TNIHELRITNTSIQFNLRNLYRLSKALFPPEPMVLREMCKQGYRDGLRFLRRNGLLN-------Q 257

  Fly   255 STFVVSETVAQPQEFDPECRECKKHR---KDALSSNMPQTVLDVIQDYIEQANKGLANWIFKHRG 316
            ...:::.....|||.|.|.....:.|   :|.:..::|..:.:.:.:...:. |.|...:.....
  Rat   258 PNPLLALPPVVPQEEDAEEAAVTEERTGGEDRILEHLPARLNEALLEACVEP-KDLMTTLSNMLP 321

  Fly   317 IKL---LSLPATVPMDFLLATISKISALTPKLTKQARVMVE 354
            ::|   :.:|.|:|::..::...::....|.:.:..|.|.|
  Rat   322 VRLATAMMVPYTLPLESAVSFTIRLLEWLPDVPEDIRWMKE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bmmNP_001163445.1 Pat_iPLA2 1..245 CDD:132857 129/249 (52%)
Pnpla2NP_001101979.2 Pat_PNPLA2 4..252 CDD:132859 127/246 (52%)
GXGXXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 14..19 4/4 (100%)
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 45..49 3/3 (100%)
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 166..168 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..478
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3773
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 261 1.000 Inparanoid score I3023
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204225at2759
OrthoFinder 1 1.000 - - FOG0000670
OrthoInspector 1 1.000 - - mtm8965
orthoMCL 1 0.900 - - OOG6_103947
Panther 1 1.100 - - O PTHR12406
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1585
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.830

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