DRSC/TRiP Functional Genomics Resources

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Protein Alignment bmm and Pnpla3

DIOPT Version :9

Sequence 1:NP_001163445.1 Gene:bmm / 39611 FlyBaseID:FBgn0036449 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006520408.1 Gene:Pnpla3 / 116939 MGIID:2151796 Length:432 Species:Mus musculus


Alignment Length:368 Identity:143/368 - (38%)
Similarity:214/368 - (58%) Gaps:43/368 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NLSFAGCGFLGIYHVGVAVCFKKYAPHLLLE--KIGGASAGSLAACCLLCDLPLGSMTSDFFRVV 64
            :||||||||||.||||..:|..:.|||||.:  ...|.|||:|.|...:|.||||.:......:|
Mouse     9 SLSFAGCGFLGFYHVGATLCLSERAPHLLRDARTFFGCSAGALHAVTFVCSLPLGRIMEILMDLV 73

  Fly    65 NEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVIISEFESREEV 129
            .:||..::|...|.|||..|:.:|||:.|||:.|:.::|::|||||||.||:||::|||.|::||
Mouse    74 RKARSRNIGTLHPFFNINKCIRDGLQESLPDNVHQVISGKVHISLTRVSDGENVLVSEFHSKDEV 138

  Fly   130 LQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLPILD-ENTITVSPFCGESDICPRDQSSQLF 193
            :.||:|:||||.|||::||.|||.||:||..|||:|:|| :.|||||||.||.||||:.:|:..|
Mouse   139 VDALVCSCFIPLFSGLIPPSFRGERYVDGGVSDNVPVLDAKTTITVSPFYGEHDICPKVKSTNFF 203

  Fly   194 HLNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNLINCRRCVAVQSTFV 258
            |:|..|.|:.:...|:....|.|||...:.:.:.|.||:.||.:||..|.:     |...|.:..
Mouse   204 HVNITNLSLRLCTGNLQLLTRALFPSDVKVMGELCYQGYLDAFRFLEENGI-----CNGPQRSLS 263

  Fly   259 VSETVAQPQEFDPECRECKKHRK------------------DALSSNMPQTVLDVIQDYIEQANK 305
            :| .||      ||.  |.::.|                  :.||..:...:.:.|:|     .:
Mouse   264 LS-LVA------PEA--CLENGKLVGDKVPVSLCFTDENIWETLSPELSTALSEAIKD-----RE 314

  Fly   306 GLANWIFKHRGIKLLS---LPATVPMDFLLATISKISALTPKL 345
            |..:.:.....:::||   ||.::|::..:|.:.::....|.:
Mouse   315 GYLSKVCNLLPVRILSYIMLPCSLPVESAIAAVHRLVTWLPDI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bmmNP_001163445.1 Pat_iPLA2 1..245 CDD:132857 122/245 (50%)
Pnpla3XP_006520408.1 Pat_PNPLA3 8..259 CDD:132860 123/254 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3193
eggNOG 1 0.900 - - E1_KOG3773
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 266 1.000 Inparanoid score I3030
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204225at2759
OrthoFinder 1 1.000 - - FOG0000670
OrthoInspector 1 1.000 - - mtm8728
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12406
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4990
SonicParanoid 1 1.000 - - X1585
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.960

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