DRSC/TRiP Functional Genomics Resources

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Protein Alignment bmm and pnpla2

DIOPT Version :10

Sequence 1:NP_001163445.1 Gene:bmm / 39611 FlyBaseID:FBgn0036449 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_005174313.3 Gene:pnpla2 / 101887155 ZFINID:ZDB-GENE-120913-3 Length:486 Species:Danio rerio


Alignment Length:427 Identity:159/427 - (37%)
Similarity:232/427 - (54%) Gaps:42/427 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NLSFAGCGFLGIYHVGVAVCFKKYAPHLL--LEKIGGASAGSLAACCLLCDLPLGSMTSDFFRVV 64
            |:||||||||||||:|||.|.:::||.|:  ...|.|||||:|.|..|:....||...::...|.
Zfish     9 NISFAGCGFLGIYHIGVASCLQEHAPFLVENARHIYGASAGALTASALVTGACLGEAGANIIDVA 73

  Fly    65 NEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVIISEFESREEV 129
            .|||:..|||..||||:...:...|.:.:|.|.:.|..|||.||||||.||:||::|.|.|.||:
Zfish    74 KEARKRFLGPMHPSFNLVKIMRTHLHRVMPVDGYIRATGRLGISLTRVTDGENVLVSHFNSNEEL 138

  Fly   130 LQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLPILD-ENTITVSPFCGESDICPRDQSSQLF 193
            :||.:|:.:||.:.|::||..:||||:||..|||||..: :||||||||.|||||||||.||...
Zfish   139 VQACICSAYIPVYCGLIPPTLQGVRYVDGGISDNLPQYELKNTITVSPFSGESDICPRDVSSTNI 203

  Fly   194 H-LNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNLINCR---RCVAVQ 254
            | |.:.||||:.:..|:.|..|.||||.|..:...|:||:.|||.||.:|.|:..|   |.:|..
Zfish   204 HELRFTNTSIQFTLANLYRVSRALFPPDPLVMKSMCKQGYRDALLFLKKNGLLQYRGPHRALAAA 268

  Fly   255 STFVVSETVAQPQ----EFDPECRECKKHRKDALSSNMPQTVLDVIQDYIEQAN---KGLANWIF 312
            :.....|:..:.:    |.:||..:.:...::.:..::|..|...:.:...:..   :.|:| :.
Zfish   269 AEGADEESDGEDEERRDEGEPEADDHRSSMEEHVFEHLPPRVHKALVEACRERRSLLQSLSN-ML 332

  Fly   313 KHRGIKLLSLPATVPMDFLLATISKISALTPKLTKQARVMVEDLILQLN----HAMRIRLLNKFT 373
            ..|....:.||.|:|::..|:...::....|.:.:....|.|..:..||    ||.|        
Zfish   333 PVRMASAILLPYTLPLESALSVSIRLLEWLPDIQEDVGWMKEQTLKLLNSVFSHAGR-------- 389

  Fly   374 LYDQPHFDATGLLHSSRLYGPRVSILVD--ECGATPL 408
                         .:|:....|||..:|  .|.:.||
Zfish   390 -------------SASQQVSARVSCQLDVRRCESAPL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bmmNP_001163445.1 Pat_iPLA2 1..245 CDD:132857 125/246 (51%)
pnpla2XP_005174313.3 None

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