DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mop and ptpn18

DIOPT Version :9

Sequence 1:NP_648722.2 Gene:mop / 39610 FlyBaseID:FBgn0036448 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_001013470.1 Gene:ptpn18 / 541324 ZFINID:ZDB-GENE-050320-12 Length:513 Species:Danio rerio


Alignment Length:304 Identity:68/304 - (22%)
Similarity:122/304 - (40%) Gaps:66/304 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1559 EKNRSLDCLPYDHARVKLDKQT----DDYINAAYMKNLSAGCPNFIVAQTPQPNTINDFWSMIWS 1619
            :|||..|.||||..||.|...|    .|||||.::|. :.....:|..|.|..:|:.|||.|||.
Zfish    58 KKNRYRDILPYDQTRVCLTPTTSEYQSDYINANFVKG-AVRNRTYIATQGPLSSTVVDFWRMIWQ 121

  Fly  1620 EKSRTVV--C--LHTPNELFDPYWPQALDQPTHYDDYTVTCLKVQQ-----------LSHCSEYQ 1669
            ...:.::  |  :....:..:.||....|..| ...:||:.|:..:           :::|.|.:
Zfish   122 HNVKVIIMACREIEMGKKKCEVYWASTSDTST-LGPFTVSTLEESRPNEEVIVRTLVVNYCDEAR 185

  Fly  1670 LKLSMHGADAVLDLSLLQLKQW----TKGAPAQLLGVAENALETHRQRCKAANAPQSPLIMNCLT 1730
                        .:|..|...|    ....|..:||:.|.|      |.|..| ...|::::|..
Zfish   186 ------------KVSHFQYTAWPDHGIPDMPDGILGMMELA------RQKQGN-QTDPVVIHCSA 231

  Fly  1731 GSERSELVAIGVCAI------IATQNKQPILLNTIDVWSRICAQRQNSLRD-----------SAI 1778
            |..|:.:    :||:      :.|:..|.. .|.:|:...:..||.::::.           :.:
Zfish   232 GCGRTGV----ICAVDYVNDLLLTEQIQED-FNILDLVLELRRQRPSAVQTKEQYGFVFHTVAQM 291

  Fly  1779 LEQSMQIVLCNAHNVLNKRGIMTSYQMKMAPQVTAKEQQENKDP 1822
            .::::::...||...|....:......|.|....|:...:.::|
Zfish   292 FQKALEMKNMNADTSLYINAVPPKISQKSASLAPARAPAKTRNP 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mopNP_648722.2 BRO1_HD-PTP_like 2..363 CDD:185762
V_HD-PTP_like 368..702 CDD:185747
ALIX_LYPXL_bnd 421..699 CDD:290660
Med15 808..>1246 CDD:255446
Y_phosphatase 1558..1788 CDD:278528 61/268 (23%)
PTPc 1559..1745 CDD:238006 54/208 (26%)
ptpn18NP_001013470.1 Y_phosphatase 56..290 CDD:278528 61/257 (24%)
PTPc 58..290 CDD:238006 61/257 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.