DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mop and Rhpn1

DIOPT Version :9

Sequence 1:NP_648722.2 Gene:mop / 39610 FlyBaseID:FBgn0036448 Length:1833 Species:Drosophila melanogaster
Sequence 2:XP_006241962.1 Gene:Rhpn1 / 300030 RGDID:1305688 Length:662 Species:Rattus norvegicus


Alignment Length:406 Identity:110/406 - (27%)
Similarity:154/406 - (37%) Gaps:73/406 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MLWFALKSSPEGTSFAALKKYIAEFYHEDPEAYSKEVHALETLRNQAMHTTKD--GAPVMKRYYC 71
            |:...||.:.|......||:.|:|.:.||..:|..|:..||.||......::|  |..::..||.
  Rat   116 MIPLGLKETKELDWATPLKELISEHFGEDGASYETEIQELEDLRQATRTPSRDEVGLDLLAAYYS 180

  Fly    72 QLHALQNRFPQLADRGIFTFKWKDLYHSAVHEVTDLRFERAAVLFNIAALHTQSGASVTRGDVDG 136
            ||..|..||...|......|.|.|.......:...|.||:.:|||||.|||||.||.......:|
  Rat   181 QLCFLDARFFSPARSPGLLFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDCSCTEG 245

  Fly   137 MKMACTHFQAAAWAYGELRERYANVNGGGDFMTPELLVFQQQVCFAQAQECILEKSLI-DNRKPH 200
            ...|...||.||.|:..|||.:::.....  |:...|...:|:..|||||||....|: .:..|.
  Rat   246 TSQAAEAFQRAAGAFRLLRENFSHAPSPD--MSAASLSMLEQLMVAQAQECIFRGLLLRASATPD 308

  Fly   201 I------VAKVTAQIVVYYGAALAALLTGGDDGPVAQVIDSSVYKLWKKYVRFKINYLTCILYLY 259
            |      :|:...|:...||....|:.    ..||...:.:|    |....|.|..:. |.|..|
  Rat   309 ICPDQLQLAQEATQVATEYGLVHRAMA----QPPVRDYLPAS----WTNLARVKAEHF-CALAHY 364

  Fly   260 QG------QHSEEKRQMGERVTLYQASWDKLEEARKESKG--LPDQREINESLSFTADVVEAKRK 316
            ..      ..|..|.::..:..::|.|      |..|.:|  ||..             .|.:||
  Rat   365 HAAMALCESTSAAKGELSRQEDIFQPS------ATCEPQGPTLPQH-------------PEERRK 410

  Fly   317 NAKNENEFIYHEAVPELSTIAAVQGANLVNGIGFQVSDEEHAGPDIFARLVPMKAHEASSLYSEE 381
            .||                      |:|...|   :..||........| ||.|......:.::.
  Rat   411 LAK----------------------AHLKRAI---LGQEEALRLHTLCR-VPRKVDLLQVVVTQA 449

  Fly   382 KAKLLRKYGALLEEKD 397
            ..:.|.||..|..|.|
  Rat   450 LRRSLTKYSELEREDD 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mopNP_648722.2 BRO1_HD-PTP_like 2..363 CDD:185762 100/370 (27%)
V_HD-PTP_like 368..702 CDD:185747 8/30 (27%)
ALIX_LYPXL_bnd 421..699 CDD:290660
Med15 808..>1246 CDD:255446
Y_phosphatase 1558..1788 CDD:278528
PTPc 1559..1745 CDD:238006
Rhpn1XP_006241962.1 HR1 28..112 CDD:294066
BRO1_Rhophilin_1 116..499 CDD:185771 110/406 (27%)
PDZ_signaling 520..594 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.