DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mop and Pdcd6ip

DIOPT Version :9

Sequence 1:NP_648722.2 Gene:mop / 39610 FlyBaseID:FBgn0036448 Length:1833 Species:Drosophila melanogaster
Sequence 2:XP_011241243.1 Gene:Pdcd6ip / 18571 MGIID:1333753 Length:877 Species:Mus musculus


Alignment Length:1050 Identity:246/1050 - (23%)
Similarity:421/1050 - (40%) Gaps:239/1050 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LWFALKSSPEGTSFAALKKYIAEFY---HEDPEAYSKEVHALETLRNQAMHTTKDGAPVMK---- 67
            :|..||.:.|......|.|:|.:.|   .|:...|.:....|..||..|:     |.|:.|    
Mouse     5 IWVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRSAL-----GRPLDKHEGA 64

  Fly    68 -----RYYCQLHALQNRFPQLADRGIFTFKWKDLYH-------SAVHEVTDLRFERAAVLFNIAA 120
                 |||.|:.:::.:||...::...||.|||.:.       |....:..|.:|::.||||.||
Mouse    65 LETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAA 129

  Fly   121 LHTQSGASVTRGDVDGMKMACTHFQAAAWAYGELRE-------RYANVNGGGDFMTPELLVFQQQ 178
            |.:|..|.....:.:|:|.|...:|.|:.|:..:::       |...|:     ::|:.:.....
Mouse   130 LASQIAAEQNLDNDEGLKTAAKQYQFASGAFLHIKDTVLSALSREPTVD-----ISPDTVGTLSL 189

  Fly   179 VCFAQAQECILEKSLIDNRKPHIVAKVTAQIVVYYGAALAALLTGGDDGPVAQVIDSSVYK-LWK 242
            :..|||||....|:..|..|..|:||:..|...|:|.|                .....|| ...
Mouse   190 IMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDA----------------FKQCQYKDTLP 238

  Fly   243 KYVRFKINYLT-----CILYLYQGQH----SEEKRQMGERVTLYQASWDKLEEARKESKGLPDQR 298
            ||..|:..:.|     ||:......|    ::::::.||.:.       :|:.|.:..|.:..:.
Mouse   239 KYFYFQEVFPTLAAKQCIMQANAEYHQSILAKQQKKFGEEIA-------RLQHAAELIKNVASRY 296

  Fly   299 EINESLSFTADVVEAKRKNAKNENEFIYHEAVPELSTIAAVQGANLV--NGIGFQVSDEEHAGPD 361
            :...::...:|.:......||.:|:||||:.||:|..:..:..|.||  ..:...||.:   ..|
Mouse   297 DEYVNVKDFSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKPTPVNVPVSQK---FTD 358

  Fly   362 IFARLVPMKAHEASSLYSEEKAKLLRKYGALLEEKDTQLESYMSSLTLDNLNINEEQANKLPQGI 426
            :|.::||:...::.:::|:.||.|:.:..|.:.|..|.....::||.|. ..|.:...:.:||.|
Mouse   359 LFEKMVPVSVQQSLAVFSQRKADLVNRSIAQMREATTLANGVLASLNLP-AAIEDVSGDTVPQSI 422

  Fly   427 VDRCAAL--NANKTAISDLVEAMSQLAEITADVETNLGEISSMLEAEAKAEREFQS--ATGVQRT 487
            :.:..::  ......:..|::.:.:|.:...::   |.|...:|:.|...:.:.::  ....|||
Mouse   423 LTKSTSVVEQGGIQTVDQLIKELPELLQRNREI---LEESLRLLDEEEATDNDLRAKFKDRWQRT 484

  Fly   488 PNAHITE-LSREFQKYSEAHARAGESNNTLRKAMSLHVNNLKILARPLPEIQQLMPKL--SSELN 549
            |:..:.: |..|..|:.....:|.:::..:::....|.:.:.:|.:|.||:...:|..  :..:.
Mouse   485 PSNDLYKPLRAEGAKFRAVLDKAVQADGQVKERYQSHRDTIALLCKPEPELNAAIPSANPAKTMQ 549

  Fly   550 TTEIFRDVKLILNKVNEMKAQRAQFHADLRIAINEDDITGKVIAHGGQEGL---QALFATELGKH 611
            .:|:...:|.:|:.::|:|.:|.....||: ::| .|:|.|.:....|:|:   :||..|||   
Mouse   550 GSEVVSVLKSLLSNLDEIKKERESLENDLK-SVN-FDMTSKFLTALAQDGVINEEALSVTEL--- 609

  Fly   612 DKITELLDQNMVAQGNILQALTENYAKAAPVLKTLQ-------DVKQK------REHFYSSLAAS 663
            |:|          .|.:...:.|:..|...:||.:|       .:||.      ||....:||.:
Mouse   610 DRI----------YGGLTSKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATA 664

  Fly   664 YDVYEDLLAKSAKGLEFYKKLAGNVQKLLTRFRS-ARDVQSEERQQRMQSVKAATTPVVSKPIAE 727
            ||.:.:|:|...:|.:||.:|.    ::|.||:: ..|:....:.:|.:.:|.....:..:|.|.
Mouse   665 YDNFVELVANLKEGTKFYNELT----EILVRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP 725

  Fly   728 TTPVPAVSSTPKLRDYLKAKAAMADASNPAYVPTVRPVPVGSENPTQAACSYATAPPNEPPPPYS 792
            :.|.||..|:|          |...|:.|. .|..|.:||.:....|        ||..||||..
Mouse   726 SIPPPAYQSSP----------AAGHAAAPP-TPAPRTMPVSTPAKPQ--------PPARPPPPVL 771

  Fly   793 LTQQQYFDPSAAGYTNPMYQQQQQHIAPPAYKAQASPNSQTLHGALGQMNLQGQSQDNNQAGMAY 857
            ...:                      .|||..|.|.....|...|..|.                
Mouse   772 PANR----------------------VPPASAAAAPAGVGTASAAPPQT---------------- 798

  Fly   858 NYGYPSGSVPPLAYAPPGTVPASSASQGLNIQQPLYVATSGNPVSVSNPSELPSTLQAPFVVNPM 922
                |..:.||.|..||               .|.|..             .|...|.|.   ||
Mouse   799 ----PGSAPPPQAQGPP---------------YPTYPG-------------YPGYCQMPM---PM 828

  Fly   923 SNPYQTAAGYSGQAYQQVNAQAQQVTYPTAPSGSSTGQSAQQPLGYAPSQGPQQQAGGYPQSQTP 987
                    ||:..||.|.|     :.||..         ..|..|.||..||||..  ||..|.|
Mouse   829 --------GYNPYAYGQYN-----MPYPPV---------YHQSPGQAPYPGPQQPT--YPFPQPP 869

  Fly   988 QQQVGAYQQQ 997
            ||..  |.||
Mouse   870 QQSY--YPQQ 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mopNP_648722.2 BRO1_HD-PTP_like 2..363 CDD:185762 95/390 (24%)
V_HD-PTP_like 368..702 CDD:185747 80/357 (22%)
ALIX_LYPXL_bnd 421..699 CDD:290660 67/301 (22%)
Med15 808..>1246 CDD:255446 45/189 (24%)
Y_phosphatase 1558..1788 CDD:278528
PTPc 1559..1745 CDD:238006
Pdcd6ipXP_011241243.1 BRO1_Alix 2..350 CDD:185763 92/377 (24%)
V_Alix 365..703 CDD:185748 80/360 (22%)
Amelogenin <823..>877 CDD:197891 27/82 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.704428 Normalized mean entropy S2147
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D498845at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R147
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.800

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