DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mgat4a and Mgat4d

DIOPT Version :10

Sequence 1:NP_648720.3 Gene:Mgat4a / 39608 FlyBaseID:FBgn0036446 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001020837.1 Gene:Mgat4d / 304646 RGDID:1310572 Length:372 Species:Rattus norvegicus


Alignment Length:420 Identity:121/420 - (28%)
Similarity:204/420 - (48%) Gaps:59/420 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIRQRNCMLIVTALVL--APCIVILMVMGPELSTEQSLTQRLAEC--HMRLQYLESMYRARQEDV 63
            |.:..|.:..:.|::|  ..|..|        |.......:|..|  |: |::.|:|.|.:.:..
  Rat     2 KTKNVNLLFALVAVLLFGFSCFCI--------SRMNQTNNQLINCRNHV-LEFKETMLRLKNKSE 57

  Fly    64 ALLSQYLGQLQIVNVTGASAPPPPPPLPV----VNLLDGLSPEARQLLRNASHISKGGSANGSMA 124
               :.:...:::::.......|..|...:    ||:||     ..:.:.|...:.|         
  Rat    58 ---NNHQNLVKVLHQLKHKVAPAKPSGSILEKKVNMLD-----QDETVFNQFEVLK--------- 105

  Fly   125 RSQNIRLPNAYHFLPHLLDDAGSLRPAYLQSKGRSDVSIVLGVPTVRREKQSYLLGTLHNLIENM 189
                       .|||| |..||::.|.....:.|:.||..||:.|:.|...:||..||.:::..|
  Rat   106 -----------FFLPH-LRTAGNIYPDIAIGRQRAGVSFALGITTIDRGNHTYLKQTLTSVLSRM 158

  Fly   190 NDEEQNETLIIVYIGETDMESVQLIARQIESSFDQHVESGLIDIIAPAPSYYPN--FERLRITLN 252
            ..||:.::::||.:.:||...::.:...:::.|.:.|:||.:::|:....:||.  .|: :.|.|
  Rat   159 TPEEEEDSVVIVSVADTDENYLKSVVHMVKTRFRKQVQSGALEVISIPALFYPQTLLEK-KTTKN 222

  Fly   253 DPLERVKWRSKQNLDFAYLMAYAHSKGTFYVQLEDDILTKRQFITTMKKFALIKSALTKPDQPEW 317
                ...|:.||.|||..||.||..|.|:|:||||||:.|:.:.|.||.|  :.|..:|    :|
  Rat   223 ----AKNWQIKQVLDFCILMLYAQPKATYYLQLEDDIVAKKMYFTKMKDF--VNSVTSK----DW 277

  Fly   318 FVLDFCQLGFIGKMFKSAELPYLITYFQMFYNDKPVDWLLTYFIESKVCRTDKDQKHCNAEKAKY 382
            |.::|..||||||:|:|.:|...:.:|.:||..||:|.||......::|......:.|...|.:.
  Rat   278 FYIEFSVLGFIGKLFRSKDLMDFVHFFLIFYRAKPIDVLLDDIALLRMCSFGGPLRSCLQLKREV 342

  Fly   383 WQHFRKSLFQHIGTSSSLKGKVQKLKDKQF 412
            ...::.|||||:||.||..|:.|.|||..:
  Rat   343 RVQYKPSLFQHVGTHSSFPGREQHLKDHYY 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mgat4aNP_648720.3 Glyco_transf_54 129..412 CDD:461384 99/284 (35%)
Mgat4dNP_001020837.1 Glyco_transf_54 95..372 CDD:461384 101/308 (33%)

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