DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mgat4a and Mgat4a

DIOPT Version :10

Sequence 1:NP_648720.3 Gene:Mgat4a / 39608 FlyBaseID:FBgn0036446 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_036021327.1 Gene:Mgat4a / 269181 MGIID:2662992 Length:572 Species:Mus musculus


Alignment Length:608 Identity:223/608 - (36%)
Similarity:331/608 - (54%) Gaps:91/608 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CMLIVTA----------------LVLAPCIVIL---------MVMGPELS--TEQSLTQRLAECH 46
            |:|::.|                .||..|.|.|         :|:.|.|.  :..|..|..:.|.
Mouse     4 CLLVLEAGREEGAGLVPAHYPLPDVLRVCCVYLKEEQWTVPSLVLAPALQSVSSSSFRQGFSVCC 68

  Fly    47 MRLQYLESMYRARQEDVAL----LSQYLGQLQIVNVTGASAPPPPPPLPVVNLLDGLSPEARQLL 107
            .:|...:..:.|.:|.:.:    :||...:|..:                           .|..
Mouse    69 EKLIAYQREFLALKERLRVAEHRISQRSSELNTI---------------------------VQQF 106

  Fly   108 RNASHISKGGSANGS-----------------MARSQNIRLPNAYHFLPHLLDDAGSLRPAYLQS 155
            |.|     |...|||                 :...:::|:|:.|:.|||||.:..||:||....
Mouse   107 RRA-----GAETNGSKTALSTISDNTIKLLKELTSKKSLRVPSIYYHLPHLLQNERSLQPAVQIG 166

  Fly   156 KGRSDVSIVLGVPTVRREKQSYLLGTLHNLIENMNDEEQNETLIIVYIGETDMESVQLIARQIES 220
            .||:.||||:|:|||:||.:|||:.|||:||:|:..||:.:.:|:|:|||||::.|..:...:|.
Mouse   167 SGRTGVSIVMGIPTVKREVKSYLVETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANLEK 231

  Fly   221 SFDQHVESGLIDIIAPAPSYYPNFERLRITLNDPLERVKWRSKQNLDFAYLMAYAHSKGTFYVQL 285
            .|.:.:.|||::||:|..||||:...|:.|..|..|||:||:|||||:.:||.||..||.:|:||
Mouse   232 EFSREISSGLLEIISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQL 296

  Fly   286 EDDILTKRQFITTMKKFALIKSALTKPDQPEWFVLDFCQLGFIGKMFKSAELPYLITYFQMFYND 350
            ||||:.|:.:..|:|.|||..|:      .||.:|:|.|||||||||::.:|..::.:..|||.:
Mouse   297 EDDIIVKQNYFNTIKNFALQLSS------EEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKE 355

  Fly   351 KPVDWLLTYFIESKVCRTDKDQKHCNAEKAKYWQHFRKSLFQHIGTSSSLKGKVQKLKDKQFGSK 415
            ||:||||.:.:..|||..:||.|||:.:||.....||.|||||:|..|||.||:|||.||.:   
Mouse   356 KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDY--- 417

  Fly   416 VPQYYAHTH-NPPALVKSNIAPYKNYLLQRAYRGESYFWGLLPQPGDLVQIIFERPTQLRHYLFR 479
            :.......| ||||.|.:::..|:.:.|::.|.||.:||.:.|..||.:...|::|..:..|||.
Mouse   418 MKPLLLKVHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFH 482

  Fly   480 SGNSEHPSDRFYNTTVELLPADTLSENSSVWSSYNTTTDGYLVVGSFDSMGVAEGLLDAKIGAIK 544
            |||.|||.|...||||::||..:.|...|..:......|||..:|.|: .|||||::|..:..|.
Mouse   483 SGNQEHPGDILLNTTVDVLPLKSDSLEISKETKDKRLEDGYFRIGKFE-YGVAEGIVDPGLNPIS 546

  Fly   545 ELRLHVHSDSENWALLSEIELQE 567
            ..||.|..:|..||:|:||.:::
Mouse   547 AFRLSVIQNSAVWAILNEIHIKK 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mgat4aNP_648720.3 Glyco_transf_54 129..412 CDD:461384 139/282 (49%)
Mgat4aXP_036021327.1 Glyco_transf_54 140..417 CDD:461384 131/276 (47%)
putative TM2 helix 324..339 CDD:409189 5/14 (36%)

Return to query results.
Submit another query.