DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9384 and mgat4b

DIOPT Version :9

Sequence 1:NP_001261847.1 Gene:CG9384 / 39608 FlyBaseID:FBgn0036446 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_002941843.2 Gene:mgat4b / 100489322 XenbaseID:XB-GENE-22172622 Length:546 Species:Xenopus tropicalis


Alignment Length:546 Identity:230/546 - (42%)
Similarity:330/546 - (60%) Gaps:64/546 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 STEQSLTQRLAECHMRLQYLESMYRARQEDVALLSQYLGQLQIVNVTGASAPPPPPPLPVVNLLD 97
            :.||...:|..|.::   .|:.:.||..|..|        ||.:|.|.:|               
 Frog    52 AAEQENLKRSKELNL---VLDEIKRAISEKQA--------LQDINRTWSS--------------- 90

  Fly    98 GLSPEARQLLRNASHISKGGSANGSMARSQNI-RLPNAYHFLPHLLDDAGSLRPAYLQSKGRSDV 161
             ||.:.:..|.|.:|              :|: .||..:|.|||||....||:||....:||:.|
 Frog    91 -LSDDTKLKLWNITH--------------KNVLHLPTIFHHLPHLLSKENSLQPAVHVGQGRTGV 140

  Fly   162 SIVLGVPTVRREKQSYLLGTLHNLIENMNDEEQNETLIIVYIGETDMESVQLIARQIESSFDQHV 226
            |||:|:|:|:||..|||..||::|:..:|.:|:.:.:|:|.|.|||.:....:|..|:|.|...:
 Frog   141 SIVMGIPSVKREVHSYLTDTLNSLLSELNQQEKEDCVIVVLIAETDAQYATAVAENIKSMFPGEI 205

  Fly   227 ESGLIDIIAPAPSYYPNFERLRITLNDPLERVKWRSKQNLDFAYLMAYAHSKGTFYVQLEDDILT 291
            :|||:::|:|:|::||:|.|||.:..||.|||:||:|||||:.:||.||.||||:||||||||:.
 Frog   206 QSGLLEVISPSPNFYPDFSRLRESFGDPRERVRWRTKQNLDYCFLMMYAQSKGTYYVQLEDDIVA 270

  Fly   292 KRQFITTMKKFALIKSALTKPDQP--EWFVLDFCQLGFIGKMFKSAELPYLITYFQMFYNDKPVD 354
            |..:::|||.|||        .||  ||.:|::.|||||||:|||.:|..::.:..|||.|||:|
 Frog   271 KPNYLSTMKNFAL--------QQPSEEWMILEYSQLGFIGKLFKSLDLSLIVEFILMFYKDKPID 327

  Fly   355 WLLTYFIESKVCRTDKDQKHCNAEKAKYWQHFRKSLFQHIGTSSSLKGKVQKLKDKQFGSKVPQY 419
            |||.:.:..|||..:||.|||:.:||.....|:.|||||:||.|||.||:||||||.||.   |.
 Frog   328 WLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGK---QA 389

  Fly   420 YAHTH-NPPALVKSNIAPYKNYLLQRAYRGESYFWGLLPQPGDLVQIIFERPTQLRHYLFRSGNS 483
            ....| ||.|.|.:::..|:::.|::||..|..||...|..||.::..|.:|.::..|.|||||.
 Frog   390 LRKEHVNPAAEVSTSLKTYQHFTLEKAYLREDIFWAFTPTAGDFIRFRFFKPLRIERYFFRSGNI 454

  Fly   484 EHPSDRFYNTTVELLPAD-------TLSENSSVWSSYNTTTDGYLVVGSFDSMGVAEGLLDAKIG 541
            |||.|:.||||:|:||.|       ||.|....:|.||.|.|||..:|||:. |:|||.:|:..|
 Frog   455 EHPEDKLYNTTMEILPFDSLQSDKETLPEGRRKFSKYNRTPDGYFQIGSFNK-GIAEGEVDSSFG 518

  Fly   542 AIKELRLHVHSDSENWALLSEIELQE 567
            .::.|||.:.:||..|.:||||.:::
 Frog   519 PLEALRLSIQTDSPVWVILSEIFIKK 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9384NP_001261847.1 Glyco_transf_54 129..412 CDD:282514 143/285 (50%)
mgat4bXP_002941843.2 Glyco_transf_54 108..385 CDD:368045 143/284 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 309 1.000 Domainoid score I1322
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 431 1.000 Inparanoid score I1682
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268757at33208
OrthoFinder 1 1.000 - - FOG0002296
OrthoInspector 1 1.000 - - otm48078
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1731
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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