DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13473 and cnoX

DIOPT Version :10

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_415025.4 Gene:cnoX / 947119 ECOCYCID:G6268 Length:284 Species:Escherichia coli


Alignment Length:124 Identity:29/124 - (23%)
Similarity:65/124 - (52%) Gaps:2/124 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MQKKVIIVDSKSYFDKLIDDAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVD 68
            |..:.|:..::|...::::.:.|.. ||..|::.....|..:.|.||.||:.|.|:.::.|:|.|
E. coli     1 MSVENIVNINESNLQQVLEQSMTTP-VLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCD 64

  Fly    69 ENEDLAVQYEVNSMPTFLIIKNRVTLIQFVGGNVERVV-STVEKFVGKVEDSKEHKSKE 126
            ..:.:|.|:.:.::||..:.:|...:..|.|...|..: :.::|.:.:.|:.|..::.:
E. coli    65 AEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQ 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 CnoX 7..99 CDD:442352 23/91 (25%)
cnoXNP_415025.4 ybbN 12..107 CDD:239254 24/95 (25%)
TPR repeat 114..143 CDD:276808 2/10 (20%)
TPR_19 127..190 CDD:434038
TPR repeat 148..175 CDD:276808
TPR_20 195..284 CDD:434039
TPR repeat 215..246 CDD:276808
TPR repeat 251..283 CDD:276808
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.