DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13473 and TY1

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_177802.2 Gene:TY1 / 844010 AraportID:AT1G76760 Length:172 Species:Arabidopsis thaliana


Alignment Length:109 Identity:33/109 - (30%)
Similarity:66/109 - (60%) Gaps:9/109 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SYFDKLIDDAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDENEDLAVQYEV 79
            |:.|.|::   ::|.|||:::|||||||..:.|.|.:::.....::.|:|||.::...:|.:|::
plant    72 SFEDLLVN---SDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKI 133

  Fly    80 NSMPTFLIIKNRVTLIQFVGGNVERVVSTVEKFVGKVEDSKEHK 123
            .::|||::.|:.....:|.|      ..|.::.:.::|||.:.|
plant   134 EALPTFILFKDGEPCDRFEG------ALTAKQLIQRIEDSLKVK 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 29/95 (31%)
TY1NP_177802.2 Thioredoxin_like 69..168 CDD:412351 31/104 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 1 1.100 - - O PTHR45663
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

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