DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13473 and AT1G52990

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_564620.1 Gene:AT1G52990 / 841732 AraportID:AT1G52990 Length:313 Species:Arabidopsis thaliana


Alignment Length:85 Identity:21/85 - (24%)
Similarity:45/85 - (52%) Gaps:0/85 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDENEDLAVQYEVNSMPTFLIIKNRVT 93
            :|:|.|.|.|||||..:.|.|.::.|:|........::.|.......:::::.:||.|:.|....
plant   229 HVMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFKGGEQ 293

  Fly    94 LIQFVGGNVERVVSTVEKFV 113
            :.:..|.:.:::...|:|::
plant   294 MAKVTGADPKKLRELVKKYI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 20/81 (25%)
AT1G52990NP_564620.1 RNase_H_like 50..170 CDD:259998
TRX_family 222..310 CDD:239245 19/80 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45663
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.970

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