DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13473 and CXXS2

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_001318396.1 Gene:CXXS2 / 818676 AraportID:AT2G40790 Length:154 Species:Arabidopsis thaliana


Alignment Length:96 Identity:30/96 - (31%)
Similarity:56/96 - (58%) Gaps:2/96 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVIIVDSKSYFDKLIDDAGTN-KYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDEN 70
            ||..|.....:::.|.:|.:: |.::|.|.|:||.|...|.|..::|||.|.. |:.:.|||:|.
plant    41 KVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTS-MIFVTIDVEEL 104

  Fly    71 EDLAVQYEVNSMPTFLIIKNRVTLIQFVGGN 101
            .:.:.::.|::.||.:.:|:...:.:.|||:
plant   105 AEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 29/95 (31%)
CXXS2NP_001318396.1 TRX_family 49..138 CDD:239245 27/88 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X356
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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