DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13473 and ACHT3

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_180885.1 Gene:ACHT3 / 817890 AraportID:AT2G33270 Length:273 Species:Arabidopsis thaliana


Alignment Length:111 Identity:29/111 - (26%)
Similarity:52/111 - (46%) Gaps:25/111 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDENEDLAVQYEVNSMPTFLI 87
            :|| :|.|:|:||:..||.|..:.|::.::| :....:..|:::.:|:..|.....::.:|.|  
plant   110 NAG-DKLVVVDFFSPSCGGCKALHPKICKIA-EKNPEVEFLQVNYEEHRSLCQSLNIHVLPFF-- 170

  Fly    88 IKNRVTLIQFVGGNVERVVS------TVEKFVGKVEDSKEHKSKEG 127
                    :|..|:..||.|      |:.||       ||...|.|
plant   171 --------RFYRGSSGRVCSFSCTNATIRKF-------KEALEKHG 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 23/93 (25%)
ACHT3NP_180885.1 TRX_family 111..>175 CDD:239245 18/75 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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