DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13473 and txn2

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_991204.1 Gene:txn2 / 402938 ZFINID:ZDB-GENE-040426-1795 Length:166 Species:Danio rerio


Alignment Length:107 Identity:39/107 - (36%)
Similarity:69/107 - (64%) Gaps:4/107 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVDSKSYFDKLIDDAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDENEDLA 74
            :.|...:.:::|:   :...||::|.|.|||||.::|||||:..:...||:.:.|:|:||:.|||
Zfish    63 VQDHDDFTERVIN---SELPVLIDFHAQWCGPCKILGPRLEKAIAKQKGRVTMAKVDIDEHTDLA 124

  Fly    75 VQYEVNSMPTFLIIKNRVTLIQFVGGNVERVVST-VEKFVGK 115
            ::|.|:::||.:.::....:.||||...|..:.| |||.:|:
Zfish   125 IEYGVSAVPTVIAMRGGDVIDQFVGIKDEDQLDTFVEKLIGQ 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 36/101 (36%)
txn2NP_991204.1 TRX_family 67..161 CDD:239245 34/96 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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