DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13473 and txnl1

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_957432.2 Gene:txnl1 / 394113 ZFINID:ZDB-GENE-040426-701 Length:289 Species:Danio rerio


Alignment Length:116 Identity:34/116 - (29%)
Similarity:60/116 - (51%) Gaps:6/116 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIVDSKSYFDKLIDDAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDENED 72
            |.::.:.|.|...:..|| ::..:|:|..:.|.||..|.|....|::.| .:::.|::||...:.
Zfish     4 VKVIGNDSDFQAELSGAG-SRLTVVKFTMSGCRPCVRIAPAFNMLSNKY-PQVVFLEVDVHVCQA 66

  Fly    73 LAVQYEVNSMPTFLIIKNRVTLIQFVG----GNVERVVSTVEKFVGKVEDS 119
            .|....:::.||||..:|:|.:.|:.|    |..|::...||...|..|||
Zfish    67 TAAANNISATPTFLFFRNKVRVDQYQGADASGLEEKIKQHVENDPGSNEDS 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 29/106 (27%)
txnl1NP_957432.2 TRX_family 11..104 CDD:239245 27/94 (29%)
PITH 126..268 CDD:283785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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