DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13473 and Txl

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_523938.2 Gene:Txl / 38646 FlyBaseID:FBgn0035631 Length:287 Species:Drosophila melanogaster


Alignment Length:121 Identity:38/121 - (31%)
Similarity:68/121 - (56%) Gaps:8/121 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIVDSKSYFDKLIDDAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGRMLVLKIDVDENED 72
            |.:::.:|:|...:..||. :.|:|:|.|:|||||..|.|..|...:.| .:.:.||:|||:.:|
  Fly     3 VRVINDESHFQAELAQAGI-QLVVVDFTASWCGPCKRIAPIFETFPTKY-PKAIFLKVDVDKCQD 65

  Fly    73 LAVQYEVNSMPTFLIIKNRVTLIQFVGGNVERVVSTVEKFVGKVEDSKEHKSKEGG 128
            .|....|::||||:..:||..:.:..|.:|..:.:.:::.:|      ....:|||
  Fly    66 TAAGQGVSAMPTFIFYRNRTKIDRVQGADVNGLEAKIQEHIG------TSGGEEGG 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 34/102 (33%)
TxlNP_523938.2 TRX_family 10..103 CDD:239245 33/94 (35%)
PITH 125..266 CDD:283785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464328
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D146939at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.750

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