DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13473 and Pdia4

DIOPT Version :9

Sequence 1:NP_648717.1 Gene:CG13473 / 39603 FlyBaseID:FBgn0036442 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_001355685.1 Gene:Pdia4 / 12304 MGIID:104864 Length:699 Species:Mus musculus


Alignment Length:123 Identity:40/123 - (32%)
Similarity:64/123 - (52%) Gaps:10/123 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIVDSKSYFDKLIDDAGTNKYVLVEFFATWCGPCAMIGPRLEQLASDYFGR--MLVLKIDVDEN 70
            |.:|..|: ||.::.|  ..|.||:||:|.|||.|..:.|....|...|.|:  :::.|:|...|
Mouse   581 VKVVVGKT-FDAIVMD--PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN 642

  Fly    71 EDLAVQYEVNSMPT--FLIIKNRVTLIQFVGGNVERVVSTVEKFVGKVEDSKEHKSKE 126
            :....||:|...||  |....::...|:|.|||  |.:..:.||:.: ..:|..::||
Mouse   643 DITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGN--RDLEHLSKFIDE-HATKRSRTKE 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13473NP_648717.1 Thioredoxin 8..111 CDD:278513 35/106 (33%)
Pdia4NP_001355685.1 pdi_dom 63..164 CDD:273454
ER_PDI_fam 173..691 CDD:273457 37/115 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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