DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17177 and Mccc2

DIOPT Version :10

Sequence 1:NP_648715.1 Gene:CG17177 / 39601 FlyBaseID:FBgn0036440 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_652724.1 Gene:Mccc2 / 59261 FlyBaseID:FBgn0042083 Length:578 Species:Drosophila melanogaster


Alignment Length:260 Identity:38/260 - (14%)
Similarity:82/260 - (31%) Gaps:97/260 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   860 DLHLKIKNLPNKLNETESEKLNESHSIQKNLGYIEKQVEEIRPLFQKLQKYFRDSQANSKCCDGL 924
            |||.|...:      |:...|::.|::     |:.:|:                           
  Fly   263 DLHCKTSGV------TDHYALDDEHAL-----YLARQI--------------------------- 289

  Fly   925 KESFQSLENKLSIIKSNGYNQSLKIENQL------------------KELKDKIQENVEKTKDIK 971
                   .:.|::..:|.||..|...:|:                  :||...:..|:.|:.|::
  Fly   290 -------VSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKSFDVR 347

  Fly   972 TTLSH-----RFENIKNILG---ICNQSYIHQNVPMDTTIFLDLEKNAETLEKLAETLFKKLGVL 1028
            ..::.     ||...|.:.|   :|.              |..|..:...:......||.:..:.
  Fly   348 EVIARIVDGSRFTEFKKLYGETLVCG--------------FAKLYGHTVGIVGNNGVLFSESALK 398

  Fly  1029 DIHKPSINLNVTLNTCQENNEMLTNIQSKMGYLLKQNSKDCFEGSPTDSKNSKSLIIKTCSSNEK 1093
            ..|        .:..|.:....|..:|:..|:::.:::    |.:......:|.:....|::..|
  Fly   399 GAH--------FIQLCAQRKIPLVFLQNITGFMVGRDA----EANGIAKNGAKMVTAVACANVPK 451

  Fly  1094  1093
              Fly   452  451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17177NP_648715.1 PRK12704 111..>264 CDD:237177
SMC_prok_B 125..>424 CDD:274008
CwlO1 399..>580 CDD:443091
SMC_N 1092..>1297 CDD:481474 1/2 (50%)
Mccc2NP_652724.1 Carboxyl_trans 27..578 CDD:481543 38/260 (15%)
Blue background indicates that the domain is not in the aligned region.

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