DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17177 and Pccb

DIOPT Version :10

Sequence 1:NP_648715.1 Gene:CG17177 / 39601 FlyBaseID:FBgn0036440 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_063120991.1 Gene:Pccb / 24624 RGDID:3265 Length:565 Species:Rattus norvegicus


Alignment Length:284 Identity:51/284 - (17%)
Similarity:96/284 - (33%) Gaps:90/284 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   742 VKERCDDYNDISKWIAEQVKLSAQLRKFQRDQ--------NAILSYFYKTPTSM----------- 787
            |:.||.|:.           ::|:..||..|.        |..|.|.:....::           
  Rat    88 VEHRCADFG-----------MAAEKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQ 141

  Fly   788 -TCRFYEE--------ITLN-----RIVEKVNRINEISESQVEKLKISGDLEKDVENVLPQIKKF 838
             .|:..::        |.||     ||.|.|..:...::..:..:..||        |:|||...
  Rat   142 KICKIMDQAITVGAPVIGLNDSGGARIQEGVESLAGYADIFLRNVTASG--------VIPQISLI 198

  Fly   839 VSKGIKSCC---------ENFTKLIEHYKKDLHL------KIKNLPNKLNETESEKLN--ESHSI 886
            :.    .|.         .:||.::   |...:|      .:|::.|:  :...|:|.  ::|:.
  Rat   199 MG----PCAGGAVYSPALTDFTFMV---KDTSYLFITGPEVVKSVTNE--DVTQEQLGGAKTHTT 254

  Fly   887 QKNLGY--IEKQVE---EIRPLFQKLQKYFRDSQANSKCCDGLKESFQSLENKLSIIKSNGYNQS 946
            ...:.:  .:..|:   .:|..|..|....:|.....:|.|........|:..:.:..|..||. 
  Rat   255 VSGVAHRAFDNDVDALCNLREFFNFLPLSNQDPAPIRECHDPSDRLVPELDTVVPLESSKAYNM- 318

  Fly   947 LKI------ENQLKELKDKIQENV 964
            |.|      |.:..|:.....:|:
  Rat   319 LDIIHAVIDEREFFEIMPNYAKNI 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17177NP_648715.1 PRK12704 111..>264 CDD:237177
SMC_prok_B 125..>424 CDD:274008
CwlO1 399..>580 CDD:443091
SMC_N 1092..>1297 CDD:481474
PccbXP_063120991.1 None
Blue background indicates that the domain is not in the aligned region.

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