DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4914 and svh-1

DIOPT Version :10

Sequence 1:NP_648711.1 Gene:CG4914 / 39597 FlyBaseID:FBgn0036436 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:283 Identity:89/283 - (31%)
Similarity:140/283 - (49%) Gaps:54/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NQTSPTCSCRCGERNDE-----------SRIVGGTTTGVSEYPWMARLSYFNR----FYCGGTLI 158
            :|...:.:.:||.|..|           :|:|||..|....:||.|.|.  |:    .:||.:::
 Worm   683 SQNGMSSASQCGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALR--NKATKAHHCGASIL 745

  Fly   159 NDRYVLTAAHC------VKGFMWFMIKVTFGEHDRCNDKERPETRFVLRAFSQKFSF-----SNF 212
            :..:::|||||      |..:     :|..|:.|. |..:..|..|.|    |:..|     ..|
 Worm   746 DKTHLITAAHCFEEDERVSSY-----EVVVGDWDN-NQTDGNEQIFYL----QRIHFYPLYKDIF 800

  Fly   213 DNDIALLRL-NDRVPITSFIRPICLPRVEQRQDLFV---GTKAIATGWGTLKEDG-KPSCLLQEV 272
            .:|||:|.: ...:....:.:|||||..:     ||   |.:.:.:|||::   | :.:..||..
 Worm   801 SHDIAILEIPYPGIEFNEYAQPICLPSKD-----FVYTPGRQCVVSGWGSM---GLRYAERLQAA 857

  Fly   273 EVPVLDNDECVAQTNYTQKMITKNMMCSGYPGVGGRDSCQGDSGGPLVRLRPDDKRFEQIGIVSW 337
            .:|:::..:||..:.....| :::..|:||. .||.||||||||||.. .|.:|..|...|::||
 Worm   858 LIPIINRFDCVNSSQIYSSM-SRSAFCAGYL-EGGIDSCQGDSGGPFA-CRREDGAFVLAGVISW 919

  Fly   338 GNGCARPNYPGVYTRVTKYLDWI 360
            |:|||:...||:||.|..||.||
 Worm   920 GDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4914NP_648711.1 Tryp_SPc 128..363 CDD:238113 83/253 (33%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 83/253 (33%)
Blue background indicates that the domain is not in the aligned region.

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