DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4914 and svh-1

DIOPT Version :9

Sequence 1:NP_648711.1 Gene:CG4914 / 39597 FlyBaseID:FBgn0036436 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:283 Identity:89/283 - (31%)
Similarity:140/283 - (49%) Gaps:54/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NQTSPTCSCRCGERNDE-----------SRIVGGTTTGVSEYPWMARLSYFNR----FYCGGTLI 158
            :|...:.:.:||.|..|           :|:|||..|....:||.|.|.  |:    .:||.:::
 Worm   683 SQNGMSSASQCGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALR--NKATKAHHCGASIL 745

  Fly   159 NDRYVLTAAHC------VKGFMWFMIKVTFGEHDRCNDKERPETRFVLRAFSQKFSF-----SNF 212
            :..:::|||||      |..:     :|..|:.|. |..:..|..|.|    |:..|     ..|
 Worm   746 DKTHLITAAHCFEEDERVSSY-----EVVVGDWDN-NQTDGNEQIFYL----QRIHFYPLYKDIF 800

  Fly   213 DNDIALLRL-NDRVPITSFIRPICLPRVEQRQDLFV---GTKAIATGWGTLKEDG-KPSCLLQEV 272
            .:|||:|.: ...:....:.:|||||..:     ||   |.:.:.:|||::   | :.:..||..
 Worm   801 SHDIAILEIPYPGIEFNEYAQPICLPSKD-----FVYTPGRQCVVSGWGSM---GLRYAERLQAA 857

  Fly   273 EVPVLDNDECVAQTNYTQKMITKNMMCSGYPGVGGRDSCQGDSGGPLVRLRPDDKRFEQIGIVSW 337
            .:|:::..:||..:.....| :::..|:||. .||.||||||||||.. .|.:|..|...|::||
 Worm   858 LIPIINRFDCVNSSQIYSSM-SRSAFCAGYL-EGGIDSCQGDSGGPFA-CRREDGAFVLAGVISW 919

  Fly   338 GNGCARPNYPGVYTRVTKYLDWI 360
            |:|||:...||:||.|..||.||
 Worm   920 GDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4914NP_648711.1 Tryp_SPc 127..360 CDD:214473 82/252 (33%)
Tryp_SPc 128..363 CDD:238113 83/253 (33%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 83/253 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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