DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc1

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001072316.1 Gene:gpc1 / 779769 XenbaseID:XB-GENE-964661 Length:554 Species:Xenopus tropicalis


Alignment Length:578 Identity:164/578 - (28%)
Similarity:267/578 - (46%) Gaps:106/578 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 AGGVAGSSIIDQFSPNCSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMA 128
            |.|..||.     :.:||.|..::.|:|......||...:...||.|  |...||||..||...|
 Frog    21 AAGDTGSK-----TKSCSEVKQVYLAKGFSLNGAPQSEISGEHLRIC--PQGYTCCTSEMEENFA 78

  Fly   129 MQSRQQLEGHTKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSD 193
            ..||.:.|...::..:.:..:|.::...|...|..||..|.......|...||.:|.:||.:|.|
 Frog    79 NISRVEFEAKLRESSASIQRLLTTQHRNFDSYFQDLLNTSERVLQERFPSQYGDLYSQNSKIFRD 143

  Fly   194 LFKELETYFANGRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVPDK 258
            |:.||..|:....::|.|.:.:|::.|.:::|...:|||:|.|.||.|:.:..::||||||.|.:
 Frog   144 LYSELRQYYRGSGINLEEALIEFWSRLLERVFKAQHTQYSFSEEYMDCLVKQYEQLKPFGDTPRE 208

  Fly   259 LSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYTE-KPCTNYCV 322
            :.::..|:|:|.|::.|.|..|::|.:|...|.::.:|..|:.|:.:|..|:|::. |.|:|||.
 Frog   209 VKLKAARAFIAARSFVQGLNAAADVVRKANQVPMSTECARAVMKLVYCPHCRGHSSIKLCSNYCW 273

  Fly   323 NVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNR 387
            ||::|||..|.:.||||.|...::..||::..|:.|:..:|..::.||||||.:.|::.:.:||:
 Frog   274 NVMRGCLANQADLDSEWRNLIESLLLVADKFNGASNVENIVGAIHTKISEAITHMQENKELLTNK 338

  Fly   388 VFQGCGRPKLKKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSA 452
            ||:.||.||                                                        
 Frog   339 VFKICGTPK-------------------------------------------------------- 347

  Fly   453 QQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVR 517
                     |:..|.              |.:::|||.:..::|.         .....:|.::.
 Frog   348 ---------KTNKGS--------------KSEERRRKGKATQEDK---------SAVATMDNLIS 380

  Fly   518 DIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRY----MHSITTEHGSNPEFTG 578
            |::..:.|.:.:|.:||...|:.:..|...:.| .||||.|..||    |.|......:|||.  
 Frog   381 DVKGILSDIQDYWVSLPSLFCTEKVTAGPGNED-KCWNGITKGRYMPEPMGSGLANQINNPEV-- 442

  Fly   579 NPASTKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDD 636
            :...||....:..|:..||.....|||||||.||::.:..:   ..||:|||.|..:|
 Frog   443 DVDITKPDMTIRQQIMQLKIMTSRLRNAYNGNDVDFQDTSD---DMSGSGSGDGCNED 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 152/538 (28%)
gpc1NP_001072316.1 Glypican 14..548 CDD:366494 164/578 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..369 8/101 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 274 1.000 Domainoid score I1735
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 356 1.000 Inparanoid score I2182
OMA 1 1.010 - - QHG46379
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm48980
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3318
SonicParanoid 1 1.000 - - X519
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.110

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