DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and Gpc2

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_766000.1 Gene:Gpc2 / 71951 MGIID:1919201 Length:579 Species:Mus musculus


Alignment Length:682 Identity:171/682 - (25%)
Similarity:271/682 - (39%) Gaps:139/682 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PLLLLLLTTHLPPTLQADNGPAPQVAALAAPNPAGGVAGSSIIDQFSPNCSAVTHIFQARGIDAI 95
            |||||||  ||.|.|...:|...:|..                     :|:....:..|||....
Mouse     6 PLLLLLL--HLCPGLGPGHGSEAKVVR---------------------SCAETRQVLGARGYSLN 47

  Fly    96 EIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDI 160
            .||....:...|:.|  |...|||:...|.::...:.....|..:|..|.:...|.::..||.:.
Mouse    48 LIPPSLISGEHLQVC--PQEYTCCSSETEQKLIRDAEVTFRGLVEDSGSFLIHTLAARHRKFNEF 110

  Fly   161 FTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGRVDLLEVMDKFFNTLYQKMF 225
            |..:|..|:.....:|..:||.:|.:::.:|:.||..|..|:......|.:.:..|:..|.::.|
Mouse   111 FREMLSISQHSLAQLFSHSYGRLYSQHAVIFNSLFSGLRDYYEKSGEGLDDTLADFWAQLLERAF 175

  Fly   226 TVLNTQYTFDENYMRCVSEHMK----ELKPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKK 286
            .:|:.||:|..:::.|::....    .|:||||.|.:|.:||.|:.||.|...|.|.|...|..:
Mouse   176 PLLHPQYSFPPDFLLCLTRLTSTADGSLQPFGDSPRRLRLQISRALVAARALVQGLETGRNVVSE 240

  Fly   287 VLNVRLNADCTGALTKMQHCGACKGYTE-KPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVA 350
            .|.|.:...|..||.::..|..|:|... .||..:|:||..|||. ....:.||..:...:..:|
Mouse   241 ALKVPVLEGCRQALMRLIGCPLCRGVPSLMPCRGFCLNVAHGCLS-SRGLEPEWGGYLDGLLLLA 304

  Fly   351 ERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILN 415
            |:|.|.|:..:..|.:.:||||.:|:.|::...::.:|||.||.|                    
Mouse   305 EKLQGPFSFELAAESIGVKISEGLMHLQENSVKVSAKVFQECGTP-------------------- 349

  Fly   416 ARSPVEADTLDIDETLDEAIVLRERRAAEP---GSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQ 477
              .||::               |.|||..|   .|:...|...:|:....:|..           
Mouse   350 --HPVQS---------------RSRRAPAPREEASRSWRASAEEERPTTAAGTN----------- 386

  Fly   478 QQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNED 542
                                              |.|:|.::|:|:...:.||:.||.:||.:..
Mouse   387 ----------------------------------LHRLVWELRERLSRVRGFWAGLPVTVCGDSR 417

  Fly   543 IASS-SDVDGMCWNGHTIDRYMHSIT----TEHGSNPEF-TGNPASTKQTAQMASQLSHLKNAIV 601
            :|:. |.....||.|....|||..:.    .|...|||. |.:|....:..::     ||:.|..
Mouse   418 MAADLSQETAPCWTGVGRGRYMSPVVVGSLNEQLHNPELDTSSPDVPTRRRRL-----HLRAATA 477

  Fly   602 HLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFEPSHKPDVERPSVDADND 666
            .::.|..|||::..:.:|       ..||||......||..:|..|..|..:|  .||......|
Mouse   478 RMKAAALGQDLDMHDADE-------DASGSGGGQQYADDWKAGAVPVVPPARP--PRPPRPPRRD 533

  Fly   667 DDEDAGGRGHMPTHTSRPT---SGVDDKNPLI 695
            .....||.|....:..|..   |.|....||:
Mouse   534 GLGVRGGSGSARYNQGRSRNLGSSVGLHTPLV 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 136/547 (25%)
Gpc2NP_766000.1 Glypican 20..559 CDD:279494 157/658 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..382 12/71 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..552 21/77 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837933
Domainoid 1 1.000 284 1.000 Domainoid score I1613
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46379
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm43812
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X519
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.810

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