DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc1a

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001032450.1 Gene:gpc1a / 553367 ZFINID:ZDB-GENE-051120-147 Length:554 Species:Danio rerio


Alignment Length:638 Identity:159/638 - (24%)
Similarity:269/638 - (42%) Gaps:137/638 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 ALAAPNPAGGVAGSSIIDQFSPNCSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTY 121
            :|:|.| |||.|.|         |:.|...:..:|.....:||...:...||.|  |...||||.
Zfish    16 SLSAEN-AGGKARS---------CTDVRQFYSGKGFTLNGVPQSEISGEHLRIC--PQGYTCCTS 68

  Fly   122 NMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYER 186
            .||..::..||::.||..::....:..:|.::...|...|..||..|.......|:...|.:|..
Zfish    69 AMEETLSNLSRREFEGLVREAGRSIQALLNAQYRTFDTYFLELLDGSERWLEEAFVAALGELYRL 133

  Fly   187 NSYVFSDLFKELETYFANGRVDLLEVMDKFFNTLYQKMFTVLN--TQYTFDENYMRCVSEHMKEL 249
            |:.||.||:.||..|::...::|.|.:|:|:..|.:::....:  |.....::::.|.|:..:.|
Zfish   134 NAGVFRDLYAELHRYYSGASLNLEEALDEFWMKLLERLLKASDPETASLLSDDFLDCASKQTETL 198

  Fly   250 KPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGY-T 313
            :||||.|.:|..::.|:|:|.|.:.|.|..|.|:.:||..|.|:.:|..|:.|:.:|..|:|. :
Zfish   199 RPFGDAPRELKAKLVRAFIAARAFVQGLNAAGEIVRKVSQVPLSPECNRAIMKLVYCPHCRGLGS 263

  Fly   314 EKPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQ 378
            .|||.|||.||:||||..|.:.|:||::....|.:||.......::..|:..:.::||||::..|
Zfish   264 VKPCINYCKNVMKGCLANQADLDTEWQSLIETMLQVASSFGAEPSMDTVIYSIPVRISEAVLAMQ 328

  Fly   379 DSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAA 443
            ::.:..|::||:.||                                                  
Zfish   329 ENMEIYTSKVFKACG-------------------------------------------------- 343

  Fly   444 EPGSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGR 508
            :.|.:.|.:..|:|.                             :|::......:...:.....|
Zfish   344 DRGEEGTPSSISEEP-----------------------------KKKERTVTALEYKPSPKSAAR 379

  Fly   509 EPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSITTEHGSN 573
               |:..|.|:..::|:.:.:|..||.::||.:  .:||.....||||.|...|:..:..:..:|
Zfish   380 ---LEVQVTDVYSKLKEMQLYWIQLPSALCSGK--TASSTTGDKCWNGITKASYLPEVMGDGLAN 439

  Fly   574 PEFTGNPA----STKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSE 634
            .  ..||.    .||....:..|:..||.....|:||..|.||::                   :
Zfish   440 Q--INNPEVEIDITKPDRTIRQQIMLLKIMSNRLKNALEGNDVDF-------------------Q 483

  Fly   635 DDEDDDEGSGLG-----------PFEPSHKPDVERPSVDADNDDDEDAGGRGH 676
            |..||..|||.|           |  |...|..:||.:.|...:::...|.|:
Zfish   484 DTSDDFSGSGSGMCADHLCVRGRP--PVFGPKTDRPKLYATGPENKRVKGSGN 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 135/540 (25%)
gpc1aNP_001032450.1 Glypican 20..552 CDD:279494 157/634 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581726
Domainoid 1 1.000 278 1.000 Domainoid score I1678
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 353 1.000 Inparanoid score I2219
OMA 1 1.010 - - QHG46379
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm24302
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3318
SonicParanoid 1 1.000 - - X519
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.900

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