DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dlp and gpc2

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001289182.1 Gene:gpc2 / 503792 ZFINID:ZDB-GENE-050302-31 Length:576 Species:Danio rerio


Alignment Length:593 Identity:171/593 - (28%)
Similarity:273/593 - (46%) Gaps:105/593 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 CSAVTHIFQARGIDA-----IEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHT 139
            |.|.....::|.:.|     |..||...:...||:|  |...|||:.:||..:...|:|......
Zfish    22 CGAARSCAESRRVYAENHGSIPAPQTLISGEHLRFC--PRDYTCCSSHMEDTLTQHSQQHFLSAV 84

  Fly   140 KDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFAN 204
            :|....:.........:|.::|..|:..|....:.||..|||..|.:|:::.:.||.:|..|:..
Zfish    85 RDSSHFLFSSFSHTHRRFDELFRKLIDVSEESMSEMFTHTYGRRYTQNAHIITQLFTDLRRYYTG 149

  Fly   205 GRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFVA 269
            |||.|.||:|.|:..|.:.:|::||.||...::|:.||.:|.::|.||||.|.||..|:.|:|.|
Zfish   150 GRVSLAEVLDDFWAGLLECVFSLLNPQYELSDDYLECVRKHSEQLLPFGDRPLKLHTQVSRAFTA 214

  Fly   270 TRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYTE-KPCTNYCVNVIKGCLHYQH 333
            .|...|||....|:..|...:|...:|..||.:...|..|:|... |||.:.|:|::||||..|.
Zfish   215 ARALVQALAAGREIVSKATQLRAGPECVRALMRQWFCPLCRGLPSLKPCHSLCLNIMKGCLANQA 279

  Fly   334 EFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLK 398
            :.:|||.:|..|:..|.|:|.|.||..:..:.:.:.:||.|||.|::...|:.:||||||.|:  
Zfish   280 DLNSEWNSFIDALTVVVEKLGGPFNFELAADAIAVTVSEGIMNMQENSISISAKVFQGCGIPR-- 342

  Fly   399 KMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGKS 463
                                ||                        ||..:.||           
Zfish   343 --------------------PV------------------------PGRNKRSA----------- 352

  Fly   464 GNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKK 528
                                 .:|..:...|....::...||.|.:  ||::|::::.|:|..:.
Zfish   353 ---------------------AERDAKPKFRSFRTEEKPSSGSGTD--LDQLVQELQARLKPMRG 394

  Fly   529 FWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSITTE----HGSNPEF---TGNPASTKQT 586
            ||..|||::||:|..|:....:..||||.|..||:.::|.:    ..:|||.   ...|.:  :|
Zfish   395 FWLALPHTICSDEHTAADVTNEEQCWNGQTRGRYLPAVTADGLLNQLNNPELELDVSRPDT--RT 457

  Fly   587 AQMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFEPS 651
            .|:   :..|:.||..||.|.:|:|..:::.|..|  |||:|.|:.....:|..|.:.   |..:
Zfish   458 RQL---MMELRAAIHTLRLAQHGRDTHFTDGELEP--GSGSGGGASERFSDDWPEYTS---FSST 514

  Fly   652 HKPDVERP 659
            ....|::|
Zfish   515 RNTPVDKP 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 159/545 (29%)
gpc2NP_001289182.1 Glypican 23..576 CDD:279494 170/592 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm24302
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X519
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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