DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc1b

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_957314.1 Gene:gpc1b / 393995 ZFINID:ZDB-GENE-040426-1306 Length:541 Species:Danio rerio


Alignment Length:632 Identity:170/632 - (26%)
Similarity:263/632 - (41%) Gaps:140/632 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DQFSPNCSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGH 138
            |.....||.:...:..:|.:...:||...:...||.|....  ||||..||..:...||::.|..
Zfish    19 DNKPKTCSDIRLFYSNKGFNLNGVPQTEISGEHLRVCAQGY--TCCTSVMEENLLNLSRREFEMQ 81

  Fly   139 TKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFA 203
            .|:....:...|..:...|.:.|..||..|.....|.|...:|.::.:.|.||.|||.:|..||.
Zfish    82 VKESGRSLQAKLNGQFKSFDEYFLELLNRSEASLQSSFQSGFGSLFSQMSKVFQDLFSDLRRYFR 146

  Fly   204 NGRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFV 268
            ...|:|.|.:::|:..|..::|..||.||:..|.|:.||::..::|||||:.|.:|..:|.|:.:
Zfish   147 GSNVNLEEALNEFWARLLDRLFKALNPQYSIGEEYLECVAKQSEKLKPFGETPRELKTKITRTVI 211

  Fly   269 ATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYT-EKPCTNYCVNVIKGCLHYQ 332
            |.||:.|.|..:.|..:||..|.|:.:|..|:.|..:|..|.|.. .|||:|||.||:||||..|
Zfish   212 AARTFVQGLVISGEAVRKVSQVSLSTECVRAVMKQTYCPHCSGVALAKPCSNYCRNVLKGCLANQ 276

  Fly   333 HEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKL 397
            .:.|:||.|.|.||.:|.::|...:::..||..|..:|:|||:..||:.....|:||..||.|  
Zfish   277 ADLDTEWRNLADAMLEVVDKLSRPYSVDSVVLSLPKRIAEAILYMQDNQDMFINKVFLECGTP-- 339

  Fly   398 KKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGK 462
                                    |.:.:|.|.     :.|.|..||..|....||         
Zfish   340 ------------------------APSSNIQEQ-----IKRGRNTAEEVSSTPGAQ--------- 366

  Fly   463 SGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYK 527
                                                             |:|::.|:.:.::|..
Zfish   367 -------------------------------------------------LERLLSDVSRMLRDMM 382

  Fly   528 KFWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSITTEHGSNPEFTG--------NPA--- 581
            ::|.:||..:|.:.:  |.......||||.::.||:          ||..|        ||.   
Zfish   383 QYWVHLPRKLCVDRE--SGPGESDRCWNGMSVGRYL----------PEVMGDGLASQINNPEVEI 435

  Fly   582 -STKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGL 645
             .||....:..|:..||..|..|:.|.||.||::.:..:     ..:|||||...|:....|..|
Zfish   436 DITKPDMAVRKQIMQLKIMINRLKYAVNGNDVDFQDTSD-----DISGSGSGMCLDDQCSRGPRL 495

  Fly   646 GPFEPSHKPDVERPSVDADNDDDEDAGGRGHMPTHTSRPTSGVDDKN 692
                  ..|:.::|.|.|.             |:...:..:|...:|
Zfish   496 ------MSPNTDKPKVYAS-------------PSENKKVVNGRSSQN 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 153/546 (28%)
gpc1bNP_957314.1 Glypican 6..538 CDD:279494 170/632 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581724
Domainoid 1 1.000 278 1.000 Domainoid score I1678
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 353 1.000 Inparanoid score I2219
OMA 1 1.010 - - QHG46379
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm24302
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X519
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.870

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