DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc3

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001292547.1 Gene:gpc3 / 387365 ZFINID:ZDB-GENE-031212-1 Length:590 Species:Danio rerio


Alignment Length:657 Identity:140/657 - (21%)
Similarity:244/657 - (37%) Gaps:156/657 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SSIIDQFSPNCSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQ 134
            |.::|     |..|...||.........|:.|.:...|:.|: |...|||:..||.|..:.::|.
Zfish    25 SQVLD-----CREVRSSFQFLYPGMKWTPETPVSGSDLQVCQ-PKGLTCCSRKMEERYLLIAKQN 83

  Fly   135 LEGHTKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELE 199
            :|...:...:::.|::...|..|::.|..:|:..|.....:....:..:....|...:.||.::.
Zfish    84 MESSLQATSAQLKGLIIQNAALFQEAFDMVLRLGRNSTLMVLREEFPGLGAGASGAVTQLFLDMS 148

  Fly   200 TYFANGRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIK 264
            .|......::.:::..||:.|:...:..|............|:....|....:|..|..:..::.
Zfish   149 LYILGSDANVNDMVSTFFSRLFPLTYRRLLGNGAVAGISEECLRGAWKGSSAYGSFPKMMMTRLS 213

  Fly   265 RSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYTE-KPCTNYCVNVIKGC 328
            ||.:|||.:.|||....||.....::|...||..:|.|:.:|..|:...| :||...||:.:..|
Zfish   214 RSLLATRVFLQALNLGIEVVNTTQHLRAGRDCGRSLLKLWYCPHCQSLLEARPCRPLCVSTMGAC 278

  Fly   329 LHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCG 393
            |....|....|..:...:..:|..:.|..:|..||..|::.|.:|:.....|             
Zfish   279 LGGTTEVQPHWRAYVDELGSLAAAMKGEQDIEAVVLRLHVIIRQALKQAVAS------------- 330

  Fly   394 RPKLKKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQ 458
                   |..:|.::.|:.:   .:|.                 |..||....::.|||.     
Zfish   331 -------KSKVSAQVSGMCV---HAPP-----------------RVSRAVPVSAEHTSAS----- 363

  Fly   459 GVGKSGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRV 523
                                          ...:||...:.|.:|:..||.       |:....:
Zfish   364 ------------------------------TVNHNRPPMNFDPDETLFGRR-------REFISGL 391

  Fly   524 KDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTI-DRY-------MHSITTEHGS-NPEFTGN 579
            :.:.:|:|.|..::||.|..:.:|   .:||||..: |::       :|    .||| :.:.|..
Zfish   392 RGFSQFYSGLGEALCSKEPTSLNS---SLCWNGQEMTDKFPGPGLKRVH----PHGSESKQKTPE 449

  Fly   580 PASTKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGA---------------GS 629
            |.    .:|:..:|.|: |.::.:...   .:..|..::    .|.||               |.
Zfish   450 PV----ISQIIDKLKHI-NQLLRMVTL---PEKRWRARQ----GGGGARRNPSGPGQTDEDEEGL 502

  Fly   630 GSGSEDDEDDDEG-SGLGPFEPSHKPDVERPSVDADN---DD--------------DEDAG---- 672
            .||..||||:..| |||||  |..:..:...:..|||   ||              |...|    
Zfish   503 ESGDCDDEDECTGVSGLGP--PPRRKRLRIFADLADNLAIDDLTLHELLLTPRLATDAHGGSSIP 565

  Fly   673 GRGHMPT 679
            |..|:||
Zfish   566 GAAHVPT 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 109/543 (20%)
gpc3NP_001292547.1 Glypican 12..515 CDD:307347 122/596 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..450 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..520 14/47 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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