DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpn-1

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_510582.1 Gene:gpn-1 / 181658 WormBaseID:WBGene00001687 Length:543 Species:Caenorhabditis elegans


Alignment Length:549 Identity:127/549 - (23%)
Similarity:231/549 - (42%) Gaps:123/549 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 GTCCTYNMETRMAMQSRQQLEGHTKDQISR--------MSGILGSKATKFKDIFTALLKESRTQF 172
            |..|:.:.|.:..|:.|.:|:.:|.|.::|        :...|.|:...|.:.|:..|:......
 Worm    32 GVMCSSSFEDQCTMEERSRLQTNTVDMLTRKHQDRVIVIRSFLTSQIRIFNEFFSKTLRTVHMDL 96

  Fly   173 NSMFIRTYGVIYERNSYVFSDLFKELETYFAN-GRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDE 236
            :.||.:|||..|:.|..:.:|.||:::.:..: ....:..:::.||:.|:|.||::.|..|:...
 Worm    97 DLMFSKTYGSFYQENIQLLNDFFKKIKGFSVSFAETSMKTIVELFFDELFQVMFSIANPFYSITN 161

  Fly   237 NYMRCVSEHMKELKPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALT 301
            :...|:....:|::.|.|:|.|:..|:.......:.:..:|.:.:.:.:..||:....:|...||
 Worm   162 DQRVCMESFYREIEAFDDIPQKIVNQLSLPLSNWKHFLGSLESLNGILEGYLNITFKEECERGLT 226

  Fly   302 KMQHCGACKGYTEKPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPL 366
            :|:.|..|:..:||||..||||::.||.|...:.:..|.....:|.|:..:|....|:|..::|:
 Worm   227 RMETCAQCQRISEKPCQAYCVNILSGCTHQMLDSEGAWRAATESMIKLGNQLNHRQNLVSALQPI 291

  Fly   367 NIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILNARSPVEADTLDIDETL 431
            .:.||||||:||:....|||::...|                    :||                
 Worm   292 PVLISEAIMHFQEKRDYITNKMIGKC--------------------LLN---------------- 320

  Fly   432 DEAIVLRERRAAE-PGSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRD 495
            :|...||::|:|: ......:.::|::                                      
 Worm   321 NEDFGLRKKRSAKFKAFPVITTKRSRD-------------------------------------- 347

  Fly   496 DNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTID 560
                         ..||:::.:....::.::|.|:.|||..:|..||.||..  |..||||..:.
 Worm   348 -------------HLILNQMFQSFANKMDEWKVFFGNLPEYLCRGEDWASKE--DERCWNGTGVG 397

  Fly   561 RYMHSIT--TEHGSNPEFTGNPASTKQTAQMASQLS-H-LKNAIVHLRNAYNGQ----------- 610
            .|...:.  |...||||:.|....|.:...:..:|. | |.:.|.|:.:..:.|           
 Worm   398 EYKLPLVNYTNPFSNPEYQGTDFLTFRGNYIEERLRLHWLHSRISHILSGKDSQKSEAYYSHKAE 462

  Fly   611 ------DVEWSEQEELPYAGSGAGSGSGS 633
                  |.::|:.|   |..||...||||
 Worm   463 ARIQSDDEDYSDYE---YESSGNFPGSGS 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 118/527 (22%)
gpn-1NP_510582.1 Glypican 43..>414 CDD:279494 104/459 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159808
Domainoid 1 1.000 155 1.000 Domainoid score I2593
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55582
Inparanoid 1 1.050 208 1.000 Inparanoid score I2393
Isobase 1 0.950 - 0 Normalized mean entropy S6660
OMA 1 1.010 - - QHG46379
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - oto19962
orthoMCL 1 0.900 - - OOG6_105830
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3318
SonicParanoid 1 1.000 - - X519
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.690

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