DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dlp and lon-2

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_508812.3 Gene:lon-2 / 180750 WormBaseID:WBGene00003056 Length:508 Species:Caenorhabditis elegans


Alignment Length:605 Identity:103/605 - (17%)
Similarity:170/605 - (28%) Gaps:215/605 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYER 186
            ||:.|:....|..:...|           |.|......|....|:|.|:        ||.::...
 Worm    64 NMQVRLVEPFRDAIAFTT-----------GEKKHLLDFIRFVTLREVRS--------TYPLLLNY 109

  Fly   187 NSYVFSDLFKELETYFAN-----------G-RVDLLEVMDKFFNTLYQKMFTVLNTQ--YTFDEN 237
            ..::.|  |.|:...|.|           | :.::...:.||.:.:...||..|:..  .|...:
 Worm   110 TDFLNS--FDEMIGTFRNILTTENAISLTGIKYEVSTAVQKFLSAILPDMFLCLSVGKCRTVPLD 172

  Fly   238 YMRCVSEHMKELKPF-GDVPDKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALT 301
            |..|:....|....: |:.|:|:::.|..:....|.....|....:......|:.|:.:|   |.
 Worm   173 YHNCMMASTKHWSVYLGNTPNKMAMTISEAIYRYRKVEFLLVDMHKQLMNAHNLTLSHEC---LQ 234

  Fly   302 KMQHCGACK----GYTEKPCTNYCVNVIKGCLHYQHEFDSEWE---NFAMAMDKVAERLLGSFNI 359
            :..|...|.    |.|  ||...|.|.::.|.   .:|..||.   :....|....:..|..|  
 Worm   235 EYVHTLPCNCTMAGIT--PCHTSCSNSMEKCF---GKFSREWAAKLHLMRNMTSTKKSFLDEF-- 292

  Fly   360 VMVVEPLNIK--ISEAIMNFQDSGQDI-TNRVFQGCGRPKLKKMKRSISPKLQGVQILNARSPVE 421
                  |::|  |...|..|.:....: ...||..||                            
 Worm   293 ------LSLKKTIFSVIRIFIERKSYVYAEHVFNSCG---------------------------- 323

  Fly   422 ADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQQQQ 486
                    .|.|.|:            ..|......|..|...:.|.|.                
 Worm   324 --------PLGEMII------------HPSKHSVHFQSPGPFVSRGDGA---------------- 352

  Fly   487 RRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDG 551
                                         ||:::...|.    |..|...:|.:..:..:..   
 Worm   353 -----------------------------VRELQLSAKT----WDRLGRKICDHSGVVLNPT--- 381

  Fly   552 MCWNGH---TIDRYMHSITTEHGSNPEFTGNPASTKQTAQMASQLSHLKNAIVHLRNAYNGQDVE 613
            ||::|.   :||..:..||.:....|.                                    ::
 Worm   382 MCYDGTKVISIDHDLLPITKDVRPRPM------------------------------------MD 410

  Fly   614 WSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFEPSHKPDVERPSVDADNDDDEDAGGRGHMP 678
            |.|::....|.....:.:...||||.::..|.|...|   |.::|..|.|...:|          
 Worm   411 WIEKKNEKKANVEGSASNPLWDDEDSEDFDGSGSGMP---PVIDRNPVKAIIQED---------- 462

  Fly   679 THTSRPTSGVDDKNPLIHTT 698
             |........:.|.|.:..|
 Worm   463 -HPKNIDLSTNPKGPSVIVT 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 84/518 (16%)
lon-2NP_508812.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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