DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and Gpc4

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_032176.2 Gene:Gpc4 / 14735 MGIID:104902 Length:557 Species:Mus musculus


Alignment Length:649 Identity:213/649 - (32%)
Similarity:322/649 - (49%) Gaps:130/649 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LLLLLTTHLPPTLQADNGPAPQVAALAAPNPAGGVAGSSIIDQFSPNCSAVTHIFQARGIDAIEI 97
            ||.||.|               :|||:|...|..:.        |.:||.|..::.::|.:..:.
Mouse     6 LLALLCT---------------LAALSASLLAAELK--------SKSCSEVRRLYVSKGFNKNDA 47

  Fly    98 PQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDIFT 162
            |....|...|:.|  |...|||:..||.:.::||:...:....:|.:.:..|..|:..||.:.|.
Mouse    48 PLYEINGDHLKIC--PQDYTCCSQEMEEKYSLQSKDDFKTVVSEQCNHLQAIFASRYKKFDEFFK 110

  Fly   163 ALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGRVDLLEVMDKFFNTLYQKMFTV 227
            .||:.:....|.||::|||.:|.:||.:|.|||.||:.|:..|.|:|.|:::.|:..|.::||.:
Mouse   111 ELLENAEKSLNDMFVKTYGHLYMQNSELFKDLFVELKRYYVAGNVNLEEMLNDFWARLLERMFRL 175

  Fly   228 LNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRL 292
            :|:||.|.:.|:.|||::.::||||||||.||.:|:.|:|||.||:.|.|..|.:|..||..|..
Mouse   176 VNSQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVVSKVSVVNP 240

  Fly   293 NADCTGALTKMQHCGACKG-YTEKPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGS 356
            .|.||.||.||.:|..|:| .|.|||.|||.|:::|||..|.:.|.||.||..||..|||||.|.
Mouse   241 TAQCTHALLKMIYCSHCRGLVTVKPCYNYCSNIMRGCLANQGDLDFEWNNFIDAMLMVAERLEGP 305

  Fly   357 FNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILNARSPVE 421
            |||..|::|:::|||:||||.||:...::.:||||||.||                      |:.
Mouse   306 FNIESVMDPIDVKISDAIMNMQDNSVQVSQKVFQGCGPPK----------------------PLP 348

  Fly   422 ADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQQQQ 486
            |..  |..::.|:......|...|..:.|:|       .|.|                       
Mouse   349 AGR--ISRSISESAFSARFRPYHPEQRPTTA-------AGTS----------------------- 381

  Fly   487 RRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDG 551
                                     |||:|.|:::::|..|||||:||.:||::|.:|:.::.:.
Mouse   382 -------------------------LDRLVTDVKEKLKQAKKFWSSLPSTVCNDERMAAGNENED 421

  Fly   552 MCWNGHTIDRYMHSIT----TEHGSNPEFTGNPASTKQTAQMASQLSHLKNAIVHLRNAYNGQDV 612
            .||||....||:.::|    ...|:|||...:  ::|....:..|:..|:.....::|||||.||
Mouse   422 DCWNGKGKSRYLFAVTGNGLANQGNNPEVQVD--TSKPDILILRQIMALRVMTSKMKNAYNGNDV 484

  Fly   613 EWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFE---PSHKPDVERPSVDADNDDDEDAGG 673
            ::.:..:   ..||.|||||.|..:...|      ||   ..|       |..:.|:..:.|||
Mouse   485 DFFDISD---ESSGEGSGSGCEYQQCPSE------FEYNATDH-------SGKSANEKADSAGG 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 184/538 (34%)
Gpc4NP_032176.2 Glypican 26..552 CDD:279494 203/614 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 284 1.000 Domainoid score I1613
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55582
Inparanoid 1 1.050 372 1.000 Inparanoid score I2093
Isobase 1 0.950 - 0 Normalized mean entropy S6660
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm43812
orthoMCL 1 0.900 - - OOG6_105830
Panther 1 1.100 - - LDO PTHR10822
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3318
SonicParanoid 1 1.000 - - X519
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.810

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