DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and Gpc1

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_057905.1 Gene:Gpc1 / 14733 MGIID:1194891 Length:557 Species:Mus musculus


Alignment Length:565 Identity:159/565 - (28%)
Similarity:253/565 - (44%) Gaps:102/565 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 SPNCSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKD 141
            |.:||.|..|:.|:|....::||...:...||.|  |...||||..||..:|..||.:||....|
Mouse    29 SRSCSEVRQIYGAKGFSLSDVPQAEISGEHLRIC--PQGYTCCTSEMEENLANHSRMELESALHD 91

  Fly   142 QISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGR 206
            ....:...|.::.....|.|..||.:|.......|...:|.:|.:|:..|.||:.||..|:....
Mouse    92 SSRALQATLATQLHGIDDHFQRLLNDSERTLQEAFPGAFGDLYTQNTRAFRDLYAELRLYYRGAN 156

  Fly   207 VDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFVATR 271
            :.|.|.:.:|:..|.:::|..|:.|...|: |:.|:.:..:.|:||||.|.:|.::..|:|||.|
Mouse   157 LHLEETLAEFWARLLERLFKQLHPQLLPDD-YLDCLGKQAEALRPFGDAPRELRLRATRAFVAAR 220

  Fly   272 TYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYT-EKPCTNYCVNVIKGCLHYQHEF 335
            ::.|.|..||:|.:||..|.|..:|:.|:.|:.:|..|:|.. .:||.:||.||:||||..|.:.
Mouse   221 SFVQGLGVASDVVRKVAQVPLAPECSRAIMKLVYCAHCRGVPGARPCPDYCRNVLKGCLANQADL 285

  Fly   336 DSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKM 400
            |:||.|...:|..:.::..|......|:..:::.::|||...||:...:|.:|.|.||.||:   
Mouse   286 DAEWRNLLDSMVLITDKFWGPSGAESVIGGVHVWLAEAINALQDNKDTLTAKVIQACGNPKV--- 347

  Fly   401 KRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGKSGN 465
                                                                            |
Mouse   348 ----------------------------------------------------------------N 348

  Fly   466 GGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFW 530
            ..|.|....||:.:...|::                 .|.|    .|:::|.:.:.:::|.:.||
Mouse   349 PHGSGPEEKRRRGKLALQEK-----------------PSTG----TLEKLVSEAKAQLRDIQDFW 392

  Fly   531 SNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSI----TTEHGSNPEFTGNPASTKQTAQMAS 591
            .:||.::|| |.:|.|...|..||||.:..||:..:    .....:|||...:  .||....:..
Mouse   393 ISLPGTLCS-EKMAMSPASDDRCWNGISKGRYLPEVMGDGLANQINNPEVEVD--ITKPDMTIRQ 454

  Fly   592 QLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDD 636
            |:..||.....||.||.|.||::.:..:   .|||:|||.|..||
Mouse   455 QIMQLKIMTNRLRGAYGGNDVDFQDASD---DGSGSGSGGGCPDD 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 148/538 (28%)
Gpc1NP_057905.1 Glypican 22..538 CDD:279494 159/565 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..531 9/23 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837934
Domainoid 1 1.000 284 1.000 Domainoid score I1613
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 372 1.000 Inparanoid score I2093
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46379
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm43812
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3318
SonicParanoid 1 1.000 - - X519
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.900

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