DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc4

DIOPT Version :10

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_571935.2 Gene:gpc4 / 118437 ZFINID:ZDB-GENE-011119-1 Length:557 Species:Danio rerio


Alignment Length:617 Identity:199/617 - (32%)
Similarity:299/617 - (48%) Gaps:124/617 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VAGSSIIDQFSPNCSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQS 131
            |..|:..||.|.||:.|...:.::|.:..::|.|......|:.|  |...:|||..||.:::..|
Zfish    15 VLASAQADQKSKNCNEVRTAYSSKGFNVNDVPNKGVQGAHLKVC--PQGFSCCTLEMEEKLSQLS 77

  Fly   132 RQQLEGHTKDQISRMSGILGSKATK----FKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFS 192
            |..|    |..:.::|..|.|..|:    |...|..||..:....|.||:||||::|.:|..:|.
Zfish    78 RVDL----KVPVHQLSSNLQSTFTQRHRHFDQFFRELLDNAEKSLNHMFVRTYGLMYVKNKELFE 138

  Fly   193 DLFKELETYFANG--RVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDV 255
            ..|.:|..|:::|  .|:|.:::.:|::.|.::||.::|.||.|.::||.|||.|..:|||||||
Zfish   139 GFFSDLRRYYSHGSSEVNLDDMLAEFWSELLERMFRLVNVQYEFSDSYMECVSRHTDQLKPFGDV 203

  Fly   256 PDKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYTE-KPCTN 319
            |.||.:|:.|||:|.|.:.:.||...:|.:||..|..:..|..|..||.:|..|.|... |||.|
Zfish   204 PRKLRLQLTRSFIAVRAFTRGLTLMPDVVRKVSTVSASPSCVRASMKMLYCPYCSGQVALKPCKN 268

  Fly   320 YCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDI 384
            ||:||::|||..|.:.|:||.||..:|..:||||.|.||...||:|:::|||:||||.|::...:
Zfish   269 YCLNVMRGCLANQADLDTEWNNFLDSMLGLAERLEGPFNFESVVDPIDVKISDAIMNMQENSMQV 333

  Fly   385 TNRVFQGCGRPKLKKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAE----P 445
            :.:||||||:|||                                    ::..|.||:|:    |
Zfish   334 SQKVFQGCGQPKL------------------------------------SMGFRSRRSAKDSGFP 362

  Fly   446 GS-QETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGRE 509
            |. :..|.:.......|.:                                              
Zfish   363 GRFRPYSPEARPTTAAGTT---------------------------------------------- 381

  Fly   510 PILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSITTEHG--- 571
              |||::.|:::::|..|||||.||.:||..|.||.|.|    ||||....|| .|:....|   
Zfish   382 --LDRLLTDVKKKLKHAKKFWSTLPDTVCVGERIAPSDD----CWNGTAKSRY-ESVVMSSGLAN 439

  Fly   572 --SNPEFTGNPASTKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSE 634
              |||:...:  .||....:..|::.||.....|:.||.|.|:.::..:    ||||..||||.:
Zfish   440 QVSNPDVEVD--ITKPDMVIRRQIAVLKEMTSWLKAAYTGNDISFTSDD----AGSGEESGSGCD 498

  Fly   635 DDEDDDEG----SGLGPFEPS--HKPDVERPS 660
            ....:.:|    |...|.:|.  ..|:||:.|
Zfish   499 SPSCEGDGDIYFSTPAPGKPRILKTPEVEQAS 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..619 CDD:460084 178/556 (32%)
gpc4NP_571935.2 Glypican 9..538 CDD:460084 199/617 (32%)

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