DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc5b

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001289150.1 Gene:gpc5b / 101886726 ZFINID:ZDB-GENE-060503-64 Length:610 Species:Danio rerio


Alignment Length:645 Identity:151/645 - (23%)
Similarity:257/645 - (39%) Gaps:125/645 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 NCSAVTHIFQARGIDAIE-IPQKPSNERVLRYC--ESPSVGTCCTYNM-ETRMAMQSRQQLEGHT 139
            :|..|...||.|.:.::. :|:..:.:..|..|  :.|   ||||..| |:..:...|..|:...
Zfish    31 SCHEVKTAFQLRQVGSLRWVPETAATDAELLICKHQGP---TCCTRKMEESYYSAAQRDTLQNIL 92

  Fly   140 KDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYF-A 203
            .........||| .|:.|:|.|.:||..:....||:|..||..|.:....:.|.||.:|:.|. .
Zfish    93 SYSFELKYLILG-HASSFQDTFHSLLSFTLNHTNSLFDTTYETISQDARPLVSTLFNDLDLYLRG 156

  Fly   204 NGRVDLLEVMDKFFNTLYQKMFTVL------NTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQ 262
            :..|.:...:.:|::.|:..::..|      :...|:......|:.....::.|||..|.:|:..
Zfish   157 DDNVSVEHSVHRFYDKLFPLVYQHLVNPGLGSPVSTWSAEGTECLRATRHDIYPFGHHPQELAQG 221

  Fly   263 IKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYT-EKPCTNYCVNVIK 326
            :.::.|..|...:||...::|.....:|.:...|..||.:|..|..|:|.| .:||...|:||::
Zfish   222 LSKALVVGRALSRALAVGADVLNITESVGMGRVCGRALVRMLFCPHCRGLTLIRPCGGLCLNVMR 286

  Fly   327 GCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQG 391
            |||....|.|:.|.::...::|::..|...:.:.:.:..:..:|::||:..|..|..::..|.:.
Zfish   287 GCLAGVAELDAPWRDYVSLLEKLSGALSERYEVELGLLRIRERINDAILTAQLHGPHLSAVVGKV 351

  Fly   392 CGRPKLKKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQ 456
            ||         |::   :.|....|.|.:.:.|..::.:|:               .:||...|.
Zfish   352 CG---------SLT---ESVSSTPANSTLGSLTPSVNPSLE---------------LQTSNTSSS 389

  Fly   457 EQGVGKSGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQ 521
            ...:..:||      .:.....:||....:..|....|.                |.:|.::...
Zfish   390 HTTLPDTGN------QHEHIALKRRSLPLKASKYDKPRS----------------LKKISKEFMG 432

  Fly   522 RVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGH-TIDRYMHSI------TTEHGSNPEF--- 576
            .::.||.|:||||..:|..|.:..    :..||:|. .::.|...:      ..:|  |||.   
Zfish   433 YIQRYKSFFSNLPEMLCEGEVVMD----ENTCWSGEDVVESYTGHVVGNGLQAQKH--NPEIKVK 491

  Fly   577 TGNPASTKQTAQMASQLSHLKNAIVHLRN--------AYNGQDVEWSEQEELPYAGSGAGSGSGS 633
            |.||.           |..:|..:.|...        ...|.||:.|...|          |||.
Zfish   492 TANPV-----------LVSVKEMLEHFNQEMWATTGLGTGGTDVKESSSAE----------GSGE 535

  Fly   634 EDDEDDDEGSGLGPFEPSHK-----PDVERPS------VDADNDD---DEDAGGRGHMPT 679
            .||||..:|||.|. |..|.     ..|:.||      |...|:.   |....|..|:||
Zfish   536 CDDEDGCQGSGRGD-ERVHLTKENISSVQIPSQYGKIPVQPPNNGPKRDVQTSGVTHIPT 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 125/563 (22%)
gpc5bNP_001289150.1 Glypican 26..591 CDD:279494 148/640 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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