DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlp and gpc2

DIOPT Version :9

Sequence 1:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster
Sequence 2:XP_031755392.1 Gene:gpc2 / 100493961 XenbaseID:XB-GENE-6258957 Length:567 Species:Xenopus tropicalis


Alignment Length:664 Identity:184/664 - (27%)
Similarity:280/664 - (42%) Gaps:157/664 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PLLLLLLTTHLPPTLQADNGPAPQVAALAAPNPAGGVAGSSIIDQFSPNCSAVTHIFQARGIDAI 95
            |||||                 |.:|. |||        ||:.|  :.:||......:.||:...
 Frog     8 PLLLL-----------------PLIAP-AAP--------SSLTD--TRSCSNTDRELRERGLGGT 44

  Fly    96 EIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDI 160
            ...:.|.:...||.|  |...||||...|.|::.:|.:.|.....:.:|...|.|.|...||...
 Frog    45 AGVRAPISGEHLRIC--PQEYTCCTSETEIRLSEESMRDLVRIVNESLSFPLGALTSGKKKFHKF 107

  Fly   161 FTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGRVD-LLEVMDKFFNTLYQKM 224
            |.|||..:....||||:.:||.:|.:|:.:||.||.||..|:..|... :.:.:.:|:..|.::.
 Frog   108 FLALLDAAEHSLNSMFVLSYGRLYSQNAALFSTLFSELRAYYMGGGASRVADALSEFWAGLLERT 172

  Fly   225 FTVLNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKKVLN 289
            ..:|..||....:||.|.:...:||:||||.|.:|.:||.|:..|.||..:.|.|.|::......
 Frog   173 LRLLLPQYQLGADYMECAARRAEELRPFGDSPRRLRLQITRALGAARTLVEGLGTGSDIVSGAAK 237

  Fly   290 VRLNADCTGALTKMQHCGACKGYTE-KPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERL 353
            .....||..|:.:|.:|..|:|:|. .||...|:||:||||.||.:.|.:|.:....:.:|||||
 Frog   238 AAPPPDCLRAVMRMWYCPLCRGHTNLHPCHGLCLNVLKGCLAYQADMDDDWNSLIDGLQEVAERL 302

  Fly   354 LGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILNARS 418
            .|||||.:.:|.:.:|||||||:.|:....:|.::||.||.|...:.:||               
 Frog   303 AGSFNIELAMESIAVKISEAIMSLQEESVQLTAQIFQTCGTPPPARSRRS--------------- 352

  Fly   419 PVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQ 483
                                      ||                                   :.
 Frog   353 --------------------------PG-----------------------------------ED 356

  Fly   484 QQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSD 548
            .:||.:..||     |:...|..|..  :||:|.:|..:::..:..|..||.|:||:..:::...
 Frog   357 PRQRFRAYNN-----DEKPTSADGTN--IDRLVSEIVGKLRPLRGLWKLLPRSLCSDNRVSAGLS 414

  Fly   549 VDGMCWNGHTIDRYMHSITTE----HGSNP--EFTGNPASTKQTAQMASQLSHLKNAIVHLRNAY 607
            ....||||....||:..:..:    ..:||  |...:||..: |..:..|   |:.|.:.||.||
 Frog   415 NQEKCWNGQNRGRYLPQVAGDGLINQINNPEVELQMSPADPR-TRSLGPQ---LRLARMKLRAAY 475

  Fly   608 NGQDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFE-PSHKPDV----------ERPSV 661
            :|.|                   |.::|..|||...|.|..: .:.||..          :||. 
 Frog   476 SGHD-------------------SDTQDVYDDDGSGGSGDGDIATDKPVTRTVAGGTQRKDRPG- 520

  Fly   662 DADNDDDEDAGGRG 675
             .:...:...||||
 Frog   521 -KNKKQNNSGGGRG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlpNP_524071.2 Glypican 79..613 CDD:279494 156/541 (29%)
gpc2XP_031755392.1 Glypican 26..484 CDD:395918 157/565 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 274 1.000 Domainoid score I1735
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 356 1.000 Inparanoid score I2182
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275653at33208
OrthoFinder 1 1.000 - - FOG0000903
OrthoInspector 1 1.000 - - otm48980
Panther 1 1.100 - - O PTHR10822
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X519
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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